C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116440 Eef1d-013 ENSMUSG00000055762 10090 - 15:75895488-75909297 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000116440
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000116440 18.811±9.78 14.684±2.69 44.599±6.55 21.518±5.41 28.238±4.75 14.867±4.04 20.226±1.47 62.882±55.27 21.826±1.74 18.264±5.75 39.656±16.87 59.261±32.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008C2 CIL_0008C2_0002 VISTA 15:75534812-76135772
CIL_0003C6 CIL_0003C6_0002 CGP 15:75890964-75909556

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003746 IEA translation elongation factor activity
GO:0005853 IEA eukaryotic translation elongation factor 1 complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006414 IEA translational elongation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000428783 EEF1DP3-001 processed_transcript Homo_sapiens 0 401
ENST00000431410 EEF1DP5-001 processed_pseudogene Homo_sapiens 0 431
ENST00000490410 EEF1DP3-002 retained_intron Homo_sapiens 0 401
ENST00000529272 EEF1D-006 protein_coding Homo_sapiens 0 189
ENST00000529516 EEF1D-019 protein_coding Homo_sapiens 0 189
ENST00000534232 EEF1D-051 retained_intron Homo_sapiens 0 189
ENST00000534377 EEF1D-049 protein_coding Homo_sapiens 0 616
ENST00000566025 EEF1DP3-003 transcribed_unprocessed_pseudogene Homo_sapiens 0 398

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