C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S2, pseudogene 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117295 Rps2-ps13-001 ENSMUSG00000081684 10090 + X:52898588-52899469 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117295
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117295 0.058±0.02 0.342±0.16 0.515±0.37 0.070±0.04 0.181±0.10 0.166±0.06 0.038±0.00 0.076±0.03 0.198±0.11 0.092±0.04 0.074±0.03 0.249±0.16 9.477±18.62 0.121±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000JW CIL_0000JW_0002 CGP X:52791200-52956943

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314255 RPS2P28-001 processed_pseudogene Homo_sapiens 0 725
ENST00000343262 RPS2-001 protein_coding Homo_sapiens 0 1029
ENST00000393351 RP5-1106E3.1-001 processed_pseudogene Homo_sapiens 0 797
ENST00000397318 RPS2P55-001 processed_pseudogene Homo_sapiens 0 985
ENST00000402069 RP3-337H4.6-001 processed_pseudogene Homo_sapiens 0 996
ENST00000423464 RP11-183G22.1-001 processed_pseudogene Homo_sapiens 0 857
ENST00000428058 CTD-2666L21.2-001 processed_pseudogene Homo_sapiens 0 806
ENST00000433054 RP11-1O7.1-001 processed_pseudogene Homo_sapiens 0 752
ENST00000434010 RPS2P1-001 processed_pseudogene Homo_sapiens 0 797
ENST00000436136 RP11-16L9.1-001 processed_pseudogene Homo_sapiens 0 647
ENST00000438210 RP3-342P20.2-001 processed_pseudogene Homo_sapiens 0 787
ENST00000441047 RPS2P48-001 processed_pseudogene Homo_sapiens 0 900
ENST00000442812 RP11-377K22.2-001 processed_pseudogene Homo_sapiens 8.99999e-40 165
ENST00000443417 RPS2P35-001 processed_pseudogene Homo_sapiens 0 846
ENST00000445918 RP11-388B24.4-001 processed_pseudogene Homo_sapiens 0 676
ENST00000447422 RP11-109P14.8-001 processed_pseudogene Homo_sapiens 0 514
ENST00000449856 AC022210.2-001 processed_pseudogene Homo_sapiens 0 917
ENST00000457299 AC087163.2-001 processed_pseudogene Homo_sapiens 0 638
ENST00000459634 RP11-192C21.1-001 processed_pseudogene Homo_sapiens 0 706
ENST00000468126 RP11-324J13.1-001 processed_pseudogene Homo_sapiens 0 793
ENST00000474589 RP11-713P14.1-001 processed_pseudogene Homo_sapiens 0 612
ENST00000475555 RP11-364L4.1-001 processed_pseudogene Homo_sapiens 7e-24 115
ENST00000478038 RPS2P44-001 processed_pseudogene Homo_sapiens 0 628
ENST00000479476 RPS2P6-001 processed_pseudogene Homo_sapiens 0 765
ENST00000480705 RP11-296A18.5-001 processed_pseudogene Homo_sapiens 0 922
ENST00000488803 RPS2P5-001 processed_pseudogene Homo_sapiens 0 1020
ENST00000488906 RP5-867C24.1-001 processed_pseudogene Homo_sapiens 0 745
ENST00000491725 RP11-810P12.1-001 processed_pseudogene Homo_sapiens 0 621
ENST00000492365 KB-1683C8.1-001 processed_pseudogene Homo_sapiens 0 769
ENST00000526522 RPS2-006 protein_coding Homo_sapiens 0 422
ENST00000526586 RPS2-015 protein_coding Homo_sapiens 0 215
ENST00000527109 RPS2-005 retained_intron Homo_sapiens 0 418
ENST00000527871 RPS2-004 retained_intron Homo_sapiens 0 418
ENST00000529806 RPS2-008 protein_coding Homo_sapiens 0 739
ENST00000530225 RPS2-017 protein_coding Homo_sapiens 0 215
ENST00000531065 RPS2-003 retained_intron Homo_sapiens 0 761
ENST00000532746 RPS2-012 nonsense_mediated_decay Homo_sapiens 0 761
ENST00000533161 RPS2-002 retained_intron Homo_sapiens 0 418
ENST00000533186 RPS2-013 protein_coding Homo_sapiens 0 636
ENST00000533872 RPS2-011 retained_intron Homo_sapiens 0 634
ENST00000554490 RPS2P2-001 processed_pseudogene Homo_sapiens 0 658
ENST00000610837 RP11-19G24.1-001 processed_pseudogene Homo_sapiens 0 656
ENST00000612648 CTB-75G16.1-001 processed_pseudogene Homo_sapiens 0 771

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