C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11540
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117457 Gm11540-001 ENSMUSG00000082945 10090 + 11:94607402-94609036 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderLiverOvaryPlacentaENSMUST00000117457
Transcript ID Adipose Bladder Liver Ovary Placenta
ENSMUST00000117457 0.051±0.00 0.011±0.00 0.009±0.00 0.071±0.04 0.032±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088W CIL_00088W_0002 VISTA 11:94580928-95183811

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000423464 RP11-183G22.1-001 processed_pseudogene Homo_sapiens 2e-30 137
ENST00000447420 RP4-803A2.2-001 unprocessed_pseudogene Homo_sapiens 7e-19 99
ENST00000447422 RP11-109P14.8-001 processed_pseudogene Homo_sapiens 2e-19 100
ENST00000458332 RPS2P46-001 processed_pseudogene Homo_sapiens 3e-33 147
ENST00000488906 RP5-867C24.1-001 processed_pseudogene Homo_sapiens 2e-29 134
ENST00000494359 RP11-452G18.2-001 processed_pseudogene Homo_sapiens 2e-29 134

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