C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117492 Usp33-002 ENSMUSG00000025437 10090 + 3:152346489-152393330 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117492
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117492 5.999±0.35 3.768±1.11 11.431±1.27 27.675±2.71 3.626±1.83 5.051±1.78 3.048±0.51 6.274±0.49 7.852±4.57 7.210±2.10 4.109±0.44 9.901±9.34 14.646±2.17 3.039±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YZ CIL_0008YZ_0002 VISTA 3:152003123-152605850
CIL_0007KB CIL_0007KB_0002 UCNEbase 3:152232542-152459476
CIL_0002YR CIL_0002YR_0002 CGP 3:152273459-152393612
CIL_0002Y2 CIL_0002Y2_0002 CGP 3:152346478-152462826

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001664 IEA G-protein coupled receptor binding
GO:0004197 ISS cysteine-type endopeptidase activity
GO:0004221 ISS ubiquitin thiolesterase activity
GO:0004843 ISS ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005813 ISS centrosome
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0006897 IEA endocytosis
GO:0007411 IMP axon guidance
GO:0008270 ISS zinc ion binding
GO:0008277 ISS regulation of G-protein coupled receptor protein signaling pathway
GO:0016477 IMP cell migration
GO:0016579 ISS protein deubiquitination
GO:0044297 IDA cell body
GO:0051298 ISS centrosome duplication
GO:0070536 ISS protein K63-linked deubiquitination
GO:0071108 ISS protein K48-linked deubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357428 USP33-201 protein_coding Homo_sapiens 0 3175
ENST00000370792 USP33-003 protein_coding Homo_sapiens 0 2553
ENST00000370793 USP33-002 protein_coding Homo_sapiens 0 3175
ENST00000370794 USP33-001 protein_coding Homo_sapiens 0 3177
ENST00000461986 USP33-006 retained_intron Homo_sapiens 0 702
ENST00000462192 USP33-007 retained_intron Homo_sapiens 2e-38 163
ENST00000472462 USP33-008 retained_intron Homo_sapiens 0 407
ENST00000477949 USP33-009 retained_intron Homo_sapiens 0 241
ENST00000481579 USP33-004 protein_coding Homo_sapiens 0 1605
ENST00000524536 USP33-010 protein_coding Homo_sapiens 0 610
ENST00000524778 USP33-012 protein_coding Homo_sapiens 0 259
ENST00000525113 USP33-011 processed_transcript Homo_sapiens 0 375
ENST00000527390 USP33-016 nonsense_mediated_decay Homo_sapiens 0 481
ENST00000528150 USP33-014 processed_transcript Homo_sapiens 0 350
ENST00000530709 USP33-013 protein_coding Homo_sapiens 0 291
ENST00000531637 USP33-015 retained_intron Homo_sapiens 0 346

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