C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117536 Paics-002 ENSMUSG00000029247 10090 + 5:76951368-76967313 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117536
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117536 14.425±6.69 14.310±0.43 13.847±2.31 19.148±12.99 13.907±2.04 11.724±4.02 16.442±2.12 46.643±4.77 44.214±25.60 18.363±2.75 11.661±1.51 26.664±17.79 33.207±16.44 12.525±8.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084Q CIL_00084Q_0002 VISTA 5:76362343-76966797
CIL_0008G9 CIL_0008G9_0002 VISTA 5:76829880-77430993
CIL_00025Q CIL_00025Q_0002 CGP 5:76873659-76951578
CIL_0001WN CIL_0001WN_0002 CGP 5:76913249-76967509
CIL_0001WO CIL_0001WO_0002 CGP 5:76951307-76999937

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004638 IEA phosphoribosylaminoimidazole carboxylase activity
GO:0004639 IEA phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
GO:0005524 IEA ATP binding
GO:0006189 IEA 'de novo' IMP biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264221 PAICS-201 protein_coding Homo_sapiens 0 1526
ENST00000399688 PAICS-003 protein_coding Homo_sapiens 0 1434
ENST00000425324 PAICSP1-001 processed_pseudogene Homo_sapiens 0 804
ENST00000428007 PAICSP3-001 processed_pseudogene Homo_sapiens 0 821
ENST00000429118 PAICSP2-001 processed_pseudogene Homo_sapiens 0 560
ENST00000430406 PAICSP5-001 processed_pseudogene Homo_sapiens 0 1003
ENST00000462572 PAICSP6-001 processed_pseudogene Homo_sapiens 0 1002
ENST00000505164 PAICS-001 protein_coding Homo_sapiens 0 1480
ENST00000508554 PAICS-010 retained_intron Homo_sapiens 0 276
ENST00000512576 PAICS-006 protein_coding Homo_sapiens 0 1526
ENST00000514888 PAICS-002 protein_coding Homo_sapiens 0 1526
ENST00000517543 PAICSP4-001 processed_pseudogene Homo_sapiens 0 1332

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