C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 10241
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117664 Gm10241-001 ENSMUSG00000084838 10090 - 16:20176727-20177012 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverENSMUST00000117664
Transcript ID Bladder Brain Liver
ENSMUST00000117664 3.108±0.00 5.715±0.00 9.581±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G1 CIL_0005G1_0002 CGP 16:20097554-20232573
CIL_0003YG CIL_0003YG_0003 CGP 16:20141063-20241358

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314523 SUMO2-002 protein_coding Homo_sapiens 0 261
ENST00000326669 SUMO4-001 protein_coding Homo_sapiens 0 374
ENST00000404494 RP3-509I19.6-001 transcribed_processed_pseudogene Homo_sapiens 0 261
ENST00000405924 SUMO2P12-001 processed_pseudogene Homo_sapiens 1.99993e-41 171
ENST00000414746 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 431
ENST00000415468 AC079809.2-001 processed_pseudogene Homo_sapiens 0 311
ENST00000417139 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 431
ENST00000418008 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 431
ENST00000420826 SUMO2-001 protein_coding Homo_sapiens 0 462
ENST00000427515 RP11-184I16.3-001 processed_pseudogene Homo_sapiens 0 250
ENST00000428065 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 431
ENST00000428741 RP11-4K3__A.3-001 processed_pseudogene Homo_sapiens 0 289
ENST00000434672 SUMO2P8-001 processed_pseudogene Homo_sapiens 0 355
ENST00000436431 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 431
ENST00000438311 SUMO2P3-001 processed_pseudogene Homo_sapiens 0 407
ENST00000443604 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 431
ENST00000445436 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 431
ENST00000452006 SUMO2P10-001 processed_pseudogene Homo_sapiens 0 344
ENST00000455040 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 431
ENST00000456482 SUMO2P2-001 processed_pseudogene Homo_sapiens 7e-19 97
ENST00000504193 SUMO2P4-002 processed_pseudogene Homo_sapiens 0 344
ENST00000504438 SUMO2P17-001 transcribed_processed_pseudogene Homo_sapiens 0 398
ENST00000505273 SUMO2P6-001 processed_pseudogene Homo_sapiens 0 407
ENST00000506790 SUMO2P5-001 processed_pseudogene Homo_sapiens 6.02558e-44 180
ENST00000508743 SUMO2P17-002 processed_transcript Homo_sapiens 4.2039e-45 185
ENST00000511179 SUMO2P7-001 processed_pseudogene Homo_sapiens 0 350
ENST00000518873 SUMO2P18-001 processed_pseudogene Homo_sapiens 0.000001 57
ENST00000520803 SUMO2P20-001 processed_pseudogene Homo_sapiens 0 357
ENST00000536192 RP1-241P17.4-001 processed_pseudogene Homo_sapiens 0 457
ENST00000572284 RP3-509I19.6-002 processed_transcript Homo_sapiens 0 261
ENST00000578238 SUMO2-003 protein_coding Homo_sapiens 0 436
ENST00000588843 RP11-49K24.5-001 processed_pseudogene Homo_sapiens 0 348

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