C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GPN-loop GTPase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117700 Gpn1-003 ENSMUSG00000064037 10090 + 5:31494753-31497716 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLungOvaryPlacentaENSMUST00000117700
Transcript ID Adrenal Breast Colon Kidney Lung Ovary Placenta
ENSMUST00000117700 19.474±11.36 8.938±0.47 7.336±1.43 5.239±0.00 8.854±1.33 7.758±0.00 9.600±2.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013L CIL_00013L_0002 CGP 5:31485859-31512903
CIL_00013M CIL_00013M_0002 CGP 5:31494741-31527807

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264718 GPN1-001 protein_coding Homo_sapiens 0 252
ENST00000436280 GPN1-006 nonsense_mediated_decay Homo_sapiens 0 220
ENST00000478484 GPN1-007 retained_intron Homo_sapiens 0 272
ENST00000610189 GPN1-010 protein_coding Homo_sapiens 0 252
ENST00000616939 GPN1-203 protein_coding Homo_sapiens 0 252

Loading