C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ataxin 7-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117784 Atxn7l2-004 ENSMUSG00000048997 10090 - 3:108202228-108210462 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000117784
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000117784 0.802±0.00 2.417±1.33 1.244±0.33 7.885±1.67 1.532±0.99 1.165±0.38 0.412±0.00 3.806±0.71 0.923±0.21 2.124±0.00 1.628±0.69 3.154±1.09 1.001±0.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099A CIL_00099A_0002 VISTA 3:108089934-108692442
CIL_00098X CIL_00098X_0002 VISTA 3:108109603-108712500

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369869 ATXN7L2-002 retained_intron Homo_sapiens 0 1616
ENST00000369870 ATXN7L2-001 protein_coding Homo_sapiens 0 2180
ENST00000459635 ATXN7L2-005 processed_transcript Homo_sapiens 0 898
ENST00000463678 ATXN7L2-004 nonsense_mediated_decay Homo_sapiens 0 2902
ENST00000497545 ATXN7L2-003 retained_intron Homo_sapiens 0 1395
ENST00000604728 ATXN7L2-006 processed_transcript Homo_sapiens 0 468
ENST00000615509 ATXN7L2-201 protein_coding Homo_sapiens 0 2172

Loading