C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15531
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118062 Gm15531-001 ENSMUSG00000083086 10090 - 6:97890288-97890539 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyLiverLungPlacentaENSMUST00000118062
Transcript ID Bladder Breast Colon Kidney Liver Lung Placenta
ENSMUST00000118062 0.099±0.00 1.429±1.01 0.954±0.00 0.440±0.04 0.259±0.00 1.058±0.33 0.131±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TC CIL_0001TC_0003 CGP 6:97286867-98021349
CIL_0008QD CIL_0008QD_0002 VISTA 6:97812394-98414832

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368567 RPS27-001 protein_coding Homo_sapiens 0 361
ENST00000392558 RPS27-002 protein_coding Homo_sapiens 8.00001e-42 174
ENST00000422457 RP11-175B9.3-001 processed_pseudogene Homo_sapiens 0 350
ENST00000423216 RP3-423B22.5-001 processed_pseudogene Homo_sapiens 0 339
ENST00000425207 AC002075.4-001 processed_pseudogene Homo_sapiens 0 324
ENST00000426040 AC098614.1-001 processed_pseudogene Homo_sapiens 0 267
ENST00000434429 RP11-20O24.1-001 processed_pseudogene Homo_sapiens 0 302
ENST00000438127 AP000936.1-001 processed_pseudogene Homo_sapiens 0 333
ENST00000455497 RP11-360D2.2-001 processed_pseudogene Homo_sapiens 0 316
ENST00000457554 RP11-761N21.2-001 processed_pseudogene Homo_sapiens 0 366
ENST00000463110 RPS27P29-001 processed_pseudogene Homo_sapiens 0 324
ENST00000469695 AC090602.2-001 processed_pseudogene Homo_sapiens 0 283
ENST00000477151 RPS27-004 processed_transcript Homo_sapiens 0 350
ENST00000480875 RP11-10G12.1-001 processed_pseudogene Homo_sapiens 0 327
ENST00000486977 RP11-25I15.1-001 processed_pseudogene Homo_sapiens 0 350
ENST00000493224 RPS27-003 processed_transcript Homo_sapiens 0 350
ENST00000495392 RP11-543P15.1-001 processed_pseudogene Homo_sapiens 0 355
ENST00000496370 RPS27P14-001 processed_pseudogene Homo_sapiens 0 274
ENST00000604416 RP11-1029M24.4-001 processed_pseudogene Homo_sapiens 3.00004e-41 171
ENST00000611920 RPS27P14-001 processed_pseudogene Homo_sapiens 0 274

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