C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat shock protein 1 (chaperonin 10), pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118080 Hspe1-ps5-001 ENSMUSG00000084213 10090 + 2:72955898-72956194 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000118080
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000118080 0.605±0.18 0.478±0.00 1.288±0.39 1.775±0.69 0.852±0.28 0.624±0.33 0.308±0.00 0.696±0.33 0.644±0.11 2.196±2.61 0.808±0.31 0.439±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OE CIL_0007OE_0002 UCNEbase 2:72378722-73287933
CIL_0004JD CIL_0004JD_0002 CGP 2:72476159-72980446
CIL_0008JW CIL_0008JW_0002 VISTA 2:72839371-73441413
CIL_0008K1 CIL_0008K1_0002 VISTA 2:72842671-73444272
CIL_0008S8 CIL_0008S8_0002 VISTA 2:72879758-73480791

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233893 HSPE1-001 protein_coding Homo_sapiens 0 272
ENST00000409468 HSPE1-004 protein_coding Homo_sapiens 0 202
ENST00000409729 HSPE1-002 protein_coding Homo_sapiens 1.99993e-41 172
ENST00000438283 HSPE1P21-001 processed_pseudogene Homo_sapiens 6e-30 134
ENST00000463841 HSPE1-005 retained_intron Homo_sapiens 0 198
ENST00000465573 HSPE1-007 processed_transcript Homo_sapiens 3.00004e-41 172
ENST00000479457 HSPE1P6-001 processed_pseudogene Homo_sapiens 0 206
ENST00000550617 HSPE1P4-001 processed_pseudogene Homo_sapiens 0 209
ENST00000559254 HSPE1P3-001 processed_pseudogene Homo_sapiens 0 222
ENST00000561489 HSPE1P5-001 transcribed_processed_pseudogene Homo_sapiens 0 198

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