C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12418
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118116 Gm12418-001 ENSMUSG00000083139 10090 + 4:84915896-84916837 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000118116
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000118116 0.296±0.13 0.143±0.00 0.082±0.01 0.109±0.04 0.278±0.25 0.215±0.12 0.112±0.08 0.087±0.04 0.084±0.03 0.108±0.04 0.416±0.29 0.084±0.04 0.167±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PP CIL_0007PP_0002 UCNEbase 4:83661885-85119123
CIL_000148 CIL_000148_0002 CGP 4:84275095-85131921
CIL_0008E9 CIL_0008E9_0002 VISTA 4:84686009-85288497
CIL_0007VQ CIL_0007VQ_0002 VISTA 4:84695828-85296432
CIL_00013X CIL_00013X_0002 CGP 4:84884309-85639195

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000199320 DIMT1-001 protein_coding Homo_sapiens 0 1109
ENST00000419107 RP11-472F19.1-001 unprocessed_pseudogene Homo_sapiens 5e-36 152
ENST00000506390 DIMT1-003 protein_coding Homo_sapiens 0 902
ENST00000509182 DIMT1-002 retained_intron Homo_sapiens 0 813
ENST00000514605 DIMT1-005 retained_intron Homo_sapiens 0 215
ENST00000514911 DIMT1-004 nonsense_mediated_decay Homo_sapiens 0 508

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