C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoserine phosphatase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118268 Psph-004 ENSMUSG00000029446 10090 - 5:129765558-129771615 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004IC CIL_0004IC_0002 CGP 5:129725063-129787252
CIL_000645 CIL_000645_0002 CGP 5:129765558-129845820

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IBA magnesium ion binding
GO:0004647 IBA phosphoserine phosphatase activity
GO:0005737 IBA cytoplasm
GO:0006564 IBA L-serine biosynthetic process
GO:0016311 IBA dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000275605 PSPH-001 protein_coding Homo_sapiens 0 289
ENST00000395471 PSPH-002 protein_coding Homo_sapiens 0 289
ENST00000419984 PSPH-007 protein_coding Homo_sapiens 3.00018e-42 176
ENST00000421312 PSPH-003 protein_coding Homo_sapiens 1.99965e-42 176
ENST00000421626 PSPH-009 protein_coding Homo_sapiens 0 289
ENST00000424596 PSPH-010 protein_coding Homo_sapiens 0.00001 55
ENST00000427797 PSPH-011 nonsense_mediated_decay Homo_sapiens 3.00018e-42 176
ENST00000437355 PSPH-012 nonsense_mediated_decay Homo_sapiens 0 289
ENST00000472406 RP11-208G20.2-001 processed_pseudogene Homo_sapiens 7e-29 128

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