C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13196
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118297 Gm13196-001 ENSMUSG00000083378 10090 + 2:4700238-4700616 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartLiverOvaryPlacentaTestisENSMUST00000118297
Transcript ID Bladder Brain Heart Liver Ovary Placenta Testis
ENSMUST00000118297 0.071±0.00 0.194±0.06 0.169±0.00 0.170±0.12 0.100±0.00 0.100±0.08 0.234±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000966 CIL_000966_0002 VISTA 2:4256144-4857875
CIL_000965 CIL_000965_0002 VISTA 2:4287585-4888762
CIL_000968 CIL_000968_0002 VISTA 2:4582644-5183763

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000234875 RPL22-001 protein_coding Homo_sapiens 0 342
ENST00000392735 RPL22P19-001 transcribed_processed_pseudogene Homo_sapiens 0 244
ENST00000401483 AC114776.1-001 processed_pseudogene Homo_sapiens 0 243
ENST00000418623 RP11-641D5.1-001 processed_pseudogene Homo_sapiens 0 296
ENST00000419150 RP11-439A17.5-001 processed_pseudogene Homo_sapiens 0 204
ENST00000422106 RPL22P5-001 processed_pseudogene Homo_sapiens 0 204
ENST00000430042 RP11-38J22.2-001 processed_pseudogene Homo_sapiens 0 198
ENST00000434894 RPL22P11-001 processed_pseudogene Homo_sapiens 0 257
ENST00000438729 RP11-753C18.8-001 processed_pseudogene Homo_sapiens 0 270
ENST00000448535 AC009963.5-001 processed_pseudogene Homo_sapiens 0 246
ENST00000465387 RPL22-005 protein_coding Homo_sapiens 0 326
ENST00000471204 RPL22-007 protein_coding Homo_sapiens 0 342
ENST00000480427 RPL22P19-002 processed_transcript Homo_sapiens 0 244
ENST00000480661 RPL22-003 retained_intron Homo_sapiens 0 342
ENST00000497965 RPL22-002 protein_coding Homo_sapiens 0 342

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