C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12667
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118299 Gm12667-001 ENSMUSG00000082523 10090 + 4:91708638-91709969 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00074G CIL_00074G_0002 CGP 4:91250763-92147234

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000345042 HSPD1-201 protein_coding Homo_sapiens 0 340
ENST00000388967 HSPD1P6-001 transcribed_processed_pseudogene Homo_sapiens 0 296
ENST00000388968 HSPD1-001 protein_coding Homo_sapiens 0 340
ENST00000420325 HSPD1P9-001 processed_pseudogene Homo_sapiens 3e-25 121
ENST00000426480 HSPD1-009 protein_coding Homo_sapiens 2e-31 139
ENST00000430176 HSPD1-013 protein_coding Homo_sapiens 0 252
ENST00000440114 HSPD1-007 nonsense_mediated_decay Homo_sapiens 0 220
ENST00000447985 HSPD1P7-001 processed_pseudogene Homo_sapiens 1e-38 165
ENST00000452200 HSPD1-006 protein_coding Homo_sapiens 0 265
ENST00000461097 HSPD1-014 retained_intron Homo_sapiens 7.00649e-43 178
ENST00000476746 HSPD1-008 retained_intron Homo_sapiens 0 195
ENST00000486181 HSPD1-005 retained_intron Homo_sapiens 0 259
ENST00000503199 HSPD1P1-001 processed_pseudogene Homo_sapiens 0 340
ENST00000511127 HSPD1P5-001 processed_pseudogene Homo_sapiens 0 292
ENST00000531988 AP000641.1-001 processed_pseudogene Homo_sapiens 0.0000000000005 81
ENST00000547203 RP11-153M3.1-001 processed_pseudogene Homo_sapiens 0 324

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