C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12713
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118404 Gm12713-001 ENSMUSG00000081811 10090 + 11:26409207-26410501 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungOvaryPlacentaTestisENSMUST00000118404
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Ovary Placenta Testis
ENSMUST00000118404 0.056±0.00 0.135±0.00 0.055±0.00 0.105±0.04 0.121±0.00 0.128±0.00 0.069±0.03 0.129±0.07 0.186±0.10 0.035±0.02 0.093±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LM CIL_0007LM_0002 UCNEbase 11:24062983-26981636
CIL_0009DC CIL_0009DC_0002 VISTA 11:25820371-26422138
CIL_0009CV CIL_0009CV_0002 VISTA 11:25863483-26464974
CIL_0007WS CIL_0007WS_0002 VISTA 11:26189088-26791733
CIL_0004OQ CIL_0004OQ_0002 CGP 11:26386135-26593999

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0.00000008 62
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 4e-16 90
ENST00000426573 RP4-738P11.4-001 processed_pseudogene Homo_sapiens 0.00005 53
ENST00000429766 AC073900.4-001 processed_pseudogene Homo_sapiens 0.000000000000005 86
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0.00000008 62
ENST00000446956 RPL7AP15-001 processed_pseudogene Homo_sapiens 0.00000000000002 84
ENST00000449688 RP4-738P11.3-001 processed_pseudogene Homo_sapiens 0.00004 53
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 0.0000003 60
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 4e-16 90
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 0.000000001 68

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