C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, metabotropic 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118489 Grm4-001 ENSMUSG00000063239 10090 - 17:27422387-27503304 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonKidneyLiverLungPlacentaTestisENSMUST00000118489
Transcript ID Adipose Adrenal Colon Kidney Liver Lung Placenta Testis
ENSMUST00000118489 0.008±0.00 0.042±0.02 0.023±0.00 0.013±0.01 0.007±0.00 0.076±0.00 0.022±0.01 0.066±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000251 CIL_000251_0002 CGP 17:27422387-27563674

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001642 IBA group III metabotropic glutamate receptor activity
GO:0004930 ISS G-protein coupled receptor activity
GO:0005887 IBA integral component of plasma membrane
GO:0007196 ISS adenylate cyclase-inhibiting G-protein coupled glutamate receptor signaling pathway
GO:0007268 IMP synaptic transmission
GO:0007612 IMP learning
GO:0008066 ISS glutamate receptor activity
GO:0042734 IBA presynaptic membrane
GO:0043005 IDA neuron projection
GO:0051966 IBA regulation of synaptic transmission, glutamatergic

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058736 grm4-201 protein_coding Danio_rerio 0 1140
ENSDART00000013311 grm6a-201 protein_coding Danio_rerio 0 811
ENSDART00000138993 grm6a-001 protein_coding Danio_rerio 0 809
ENST00000231188 GRM6-201 protein_coding Homo_sapiens 0 976
ENST00000374177 GRM4-002 protein_coding Homo_sapiens 0 1722
ENST00000374181 GRM4-201 protein_coding Homo_sapiens 0 1722
ENST00000455714 GRM4-005 protein_coding Homo_sapiens 0 2503
ENST00000517717 GRM6-001 protein_coding Homo_sapiens 0 976
ENST00000519003 GRM6-004 retained_intron Homo_sapiens 0 357
ENST00000535756 GRM4-202 protein_coding Homo_sapiens 0 2499
ENST00000538487 GRM4-001 protein_coding Homo_sapiens 0 3216
ENST00000544773 GRM4-003 protein_coding Homo_sapiens 0 2505
ENST00000545715 GRM4-009 processed_transcript Homo_sapiens 0 2217
ENST00000607916 GRM4-006 retained_intron Homo_sapiens 0 774
ENST00000609222 GRM4-004 protein_coding Homo_sapiens 0 2499
ENST00000609278 GRM4-010 nonsense_mediated_decay Homo_sapiens 0 2217
ENST00000609860 GRM4-008 retained_intron Homo_sapiens 0 2217
ENST00000609973 GRM4-007 retained_intron Homo_sapiens 0 496

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