C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 5400
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118494 Gm5400-001 ENSMUSG00000080923 10090 + X:94311894-94312836 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000118494
Transcript ID Placenta
ENSMUST00000118494 0.056±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000285930 AKR1B1-001 protein_coding Homo_sapiens 0 898
ENST00000426422 AKR1B1-009 nonsense_mediated_decay Homo_sapiens 1.99993e-41 172
ENST00000434222 AKR1B1-002 nonsense_mediated_decay Homo_sapiens 0 676
ENST00000465351 AKR1B1-003 retained_intron Homo_sapiens 0 676
ENST00000467251 AKR1B1-015 retained_intron Homo_sapiens 0 254
ENST00000467829 AKR1B1-006 retained_intron Homo_sapiens 0 339
ENST00000484592 AKR1B1-011 retained_intron Homo_sapiens 0 383
ENST00000487438 AKR1B1-005 processed_transcript Homo_sapiens 0 431
ENST00000489022 AKR1B1-014 processed_transcript Homo_sapiens 0 383
ENST00000491741 AKR1B1-004 retained_intron Homo_sapiens 0 339
ENST00000494640 AKR1B1P2-001 processed_pseudogene Homo_sapiens 0 632
ENST00000497983 AKR1B1-013 processed_transcript Homo_sapiens 0 339
ENST00000498771 AKR1B1-010 retained_intron Homo_sapiens 0 630

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