C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: D4, zinc and double PHD fingers family 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118623 Dpf2-002 ENSMUSG00000024826 10090 - 19:5897387-5912792 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118623
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118623 18.807±3.41 10.500±2.94 14.799±1.51 31.953±19.00 20.365±4.08 15.464±1.56 16.451±1.84 15.215±3.16 11.128±5.44 22.663±5.00 20.657±0.90 28.852±13.29 9.625±3.45 12.056±5.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0002 VISTA 19:5510095-6112698

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000790 IEA nuclear chromatin
GO:0000978 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005813 IEA centrosome
GO:0008270 IEA zinc ion binding
GO:0043231 IEA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252268 DPF2-003 protein_coding Homo_sapiens 0 1770
ENST00000407765 RP1-209B5.2-001 processed_pseudogene Homo_sapiens 0 564
ENST00000415073 DPF2-002 protein_coding Homo_sapiens 0 652
ENST00000444314 DPF2-006 retained_intron Homo_sapiens 0 652
ENST00000524666 DPF2-004 retained_intron Homo_sapiens 0 366
ENST00000528416 DPF2-001 protein_coding Homo_sapiens 0 898
ENST00000530973 DPF2-009 retained_intron Homo_sapiens 0 346
ENST00000530993 DPF2-011 processed_transcript Homo_sapiens 0 782
ENST00000531989 DPF2-010 protein_coding Homo_sapiens 0 248
ENST00000532052 DPF2-005 retained_intron Homo_sapiens 0 798
ENST00000532102 DPF2-007 nonsense_mediated_decay Homo_sapiens 0 420
ENST00000532264 DPF2-012 processed_transcript Homo_sapiens 0 582
ENST00000532492 DPF2-008 retained_intron Homo_sapiens 0 250

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