C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 16216
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118970 Gm16216-001 ENSMUSG00000082107 10090 + 19:24289716-24290826 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118970
Transcript ID Adipose Bladder Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118970 0.022±0.00 0.043±0.03 0.063±0.03 0.044±0.01 0.021±0.00 0.113±0.15 0.027±0.00 0.026±0.00 0.056±0.01 0.040±0.02 0.014±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086N CIL_00086N_0002 VISTA 19:24151986-24754280
CIL_0000F1 CIL_0000F1_0002 CGP 19:24261453-24555872

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330752 HNRNPA1-023 protein_coding Homo_sapiens 0 915
ENST00000340913 HNRNPA1-002 protein_coding Homo_sapiens 0 1552
ENST00000342073 HNRNPA1P61-001 processed_pseudogene Homo_sapiens 0 832
ENST00000357495 HNRNPA1L2-001 protein_coding Homo_sapiens 0 996
ENST00000394002 HNRNPA1P6-001 unprocessed_pseudogene Homo_sapiens 0 845
ENST00000396326 HNRNPA1P32-001 processed_pseudogene Homo_sapiens 0 606
ENST00000397777 HNRNPA1P41-001 processed_pseudogene Homo_sapiens 0 582
ENST00000401954 HNRNPA1P1-001 processed_pseudogene Homo_sapiens 0 259
ENST00000403629 HNRNPA1P58-001 processed_pseudogene Homo_sapiens 0 431
ENST00000404243 HNRNPA1P37-001 processed_pseudogene Homo_sapiens 0 782
ENST00000405292 HNRNPA1P19-001 processed_pseudogene Homo_sapiens 0 403
ENST00000411674 HNRNPA1P64-001 processed_pseudogene Homo_sapiens 0 743
ENST00000411735 HNRNPA1P46-001 processed_pseudogene Homo_sapiens 0 250
ENST00000411857 HNRNPA1P54-001 processed_pseudogene Homo_sapiens 0 1242
ENST00000412087 HNRNPA1P27-001 processed_pseudogene Homo_sapiens 0 896
ENST00000414732 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 283
ENST00000416539 HNRNPA1P66-001 processed_pseudogene Homo_sapiens 0 673
ENST00000420836 HNRNPA1P70-001 processed_pseudogene Homo_sapiens 0 974
ENST00000421336 HNRNPA1P49-001 processed_pseudogene Homo_sapiens 4.00001e-41 172
ENST00000421426 HNRNPA1P33-001 processed_pseudogene Homo_sapiens 0 442
ENST00000422644 HNRNPA1P25-001 processed_pseudogene Homo_sapiens 0 658
ENST00000424115 HNRNPA1P21-001 processed_pseudogene Homo_sapiens 0 883
ENST00000424329 HNRNPA1P30-002 processed_transcript Homo_sapiens 2e-38 163
ENST00000424481 HNRNPA1P28-001 processed_pseudogene Homo_sapiens 0 852
ENST00000425806 HNRNPA1P68-001 processed_pseudogene Homo_sapiens 0 575
ENST00000426371 HNRNPA1P40-001 processed_pseudogene Homo_sapiens 0 911
ENST00000427917 HNRNPA1P63-001 processed_pseudogene Homo_sapiens 0 852
ENST00000429216 HNRNPA1P35-001 processed_pseudogene Homo_sapiens 0 985
ENST00000430583 HNRNPA1P59-001 processed_pseudogene Homo_sapiens 0 712
ENST00000431344 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 283
ENST00000432375 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 876
ENST00000436090 HNRNPA1P8-001 processed_pseudogene Homo_sapiens 0 979
ENST00000436809 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 289
ENST00000437295 HNRNPA1P22-001 processed_pseudogene Homo_sapiens 0 887
ENST00000440214 AC108039.3-001 processed_pseudogene Homo_sapiens 0 383
ENST00000440352 HNRNPA1P14-001 processed_pseudogene Homo_sapiens 0 765
ENST00000440547 HNRNPA1P39-001 processed_pseudogene Homo_sapiens 0 843
ENST00000440699 HNRNPA1P30-001 transcribed_processed_pseudogene Homo_sapiens 0 754
ENST00000440982 AC006355.3-001 processed_pseudogene Homo_sapiens 0 292
ENST00000441603 HNRNPA1P53-001 processed_pseudogene Homo_sapiens 0 815
ENST00000444886 HNRNPA1P15-001 processed_pseudogene Homo_sapiens 0 826
ENST00000444945 HNRNPA1P10-001 processed_pseudogene Homo_sapiens 0 1024
ENST00000446472 HNRNPA1P73-001 processed_pseudogene Homo_sapiens 0 656
ENST00000446988 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 887
ENST00000446999 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 887
ENST00000450405 HNRNPA1P51-001 processed_pseudogene Homo_sapiens 0 957
ENST00000450624 HNRNPA1P9-001 processed_pseudogene Homo_sapiens 0 760
ENST00000452488 HNRNPA1P57-001 transcribed_processed_pseudogene Homo_sapiens 0 828
ENST00000452680 HNRNPA1P43-001 processed_pseudogene Homo_sapiens 0 758
ENST00000452727 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 876
ENST00000453073 HNRNPA1P47-001 processed_pseudogene Homo_sapiens 0 466
ENST00000457180 HNRNPA1P2-001 processed_pseudogene Homo_sapiens 0 887
ENST00000457695 HNRNPA1P26-001 processed_pseudogene Homo_sapiens 0 1232
ENST00000458678 HNRNPA1P42-001 processed_pseudogene Homo_sapiens 0 881
ENST00000474219 HNRNPA3P8-001 processed_pseudogene Homo_sapiens 0 1040
ENST00000476029 HNRNPA1P24-001 processed_pseudogene Homo_sapiens 0 959
ENST00000484852 HNRNPA1P20-001 processed_pseudogene Homo_sapiens 0 841
ENST00000491091 HNRNPA1P23-001 processed_pseudogene Homo_sapiens 0 1031
ENST00000496620 HNRNPA1P17-001 unprocessed_pseudogene Homo_sapiens 0 569
ENST00000503999 HNRNPA1P44-001 processed_pseudogene Homo_sapiens 0 669
ENST00000505767 HNRNPA1P56-001 processed_pseudogene Homo_sapiens 0 859
ENST00000505935 HNRNPA1P55-001 processed_pseudogene Homo_sapiens 0 828
ENST00000508873 HNRNPA1P65-001 processed_pseudogene Homo_sapiens 0 721
ENST00000509706 HNRNPA1P4-001 processed_pseudogene Homo_sapiens 0 741
ENST00000510646 HNRNPA1P13-001 processed_pseudogene Homo_sapiens 0 841
ENST00000515379 HNRNPA1P12-001 processed_pseudogene Homo_sapiens 0 950
ENST00000521273 HNRNPA1P7-001 processed_pseudogene Homo_sapiens 0 1018
ENST00000521313 HNRNPA1P36-001 processed_pseudogene Homo_sapiens 0 833
ENST00000521638 HNRNPA3P7-001 processed_pseudogene Homo_sapiens 0 255
ENST00000526810 HNRNPA1P60-001 processed_pseudogene Homo_sapiens 0 785
ENST00000529475 HNRNPA1P76-001 processed_pseudogene Homo_sapiens 0 547
ENST00000529511 HNRNPA1P72-001 processed_pseudogene Homo_sapiens 3.99931e-42 176
ENST00000546500 HNRNPA1-001 protein_coding Homo_sapiens 0 1040
ENST00000546565 HNRNPA1P50-001 processed_pseudogene Homo_sapiens 0 769
ENST00000547276 HNRNPA1-012 protein_coding Homo_sapiens 0 835
ENST00000547566 HNRNPA1-006 nonsense_mediated_decay Homo_sapiens 0 1040
ENST00000547708 HNRNPA1-015 protein_coding Homo_sapiens 0 442
ENST00000547870 HNRNPA1-016 retained_intron Homo_sapiens 0 610
ENST00000548688 HNRNPA1-013 protein_coding Homo_sapiens 0 843
ENST00000550482 HNRNPA1-018 protein_coding Homo_sapiens 0 520
ENST00000550994 HNRNPA1-014 protein_coding Homo_sapiens 0 604
ENST00000551679 HNRNPA1-020 retained_intron Homo_sapiens 0 309
ENST00000551702 HNRNPA1-019 protein_coding Homo_sapiens 0 418
ENST00000558213 HNRNPA1P5-001 processed_pseudogene Homo_sapiens 0 283
ENST00000559135 HNRNPA1P71-001 processed_pseudogene Homo_sapiens 0 747
ENST00000559372 HNRNPA1P62-001 processed_pseudogene Homo_sapiens 0 806
ENST00000560782 HNRNPA1P74-001 processed_pseudogene Homo_sapiens 0 582
ENST00000560893 HNRNPA1P45-001 processed_pseudogene Homo_sapiens 0 806
ENST00000562726 HNRNPA1P48-002 processed_transcript Homo_sapiens 0 1035
ENST00000565308 HNRNPA1P48-001 transcribed_processed_pseudogene Homo_sapiens 0 1031
ENST00000570662 SRR-009 protein_coding Homo_sapiens 0 327
ENST00000575692 HNRNPA1P16-001 processed_pseudogene Homo_sapiens 0 880
ENST00000580106 HNRNPA1P11-001 processed_pseudogene Homo_sapiens 0 761
ENST00000599047 HNRNPA1P52-001 processed_pseudogene Homo_sapiens 0 821
ENST00000604027 HNRNPA1P67-001 processed_pseudogene Homo_sapiens 0 739

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