C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribisomal protein L5, pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119057 Rpl5-ps2-001 ENSMUSG00000082064 10090 + 2:154703809-154704699 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119057
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119057 0.330±0.14 0.338±0.00 0.514±0.11 0.343±0.20 0.722±0.80 0.175±0.06 0.149±0.09 0.126±0.05 0.300±0.28 0.149±0.04 0.055±0.03 0.666±0.93 1.160±1.84 0.110±0.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315741 RPL5-006 protein_coding Homo_sapiens 0 712
ENST00000370321 RPL5-001 protein_coding Homo_sapiens 0 1192
ENST00000392009 RPL5P5-001 processed_pseudogene Homo_sapiens 0 972
ENST00000396820 RPL5P8-001 processed_pseudogene Homo_sapiens 0 431
ENST00000398869 RPL5P35-001 unprocessed_pseudogene Homo_sapiens 0 728
ENST00000425640 RPL5P6-001 processed_pseudogene Homo_sapiens 0 983
ENST00000426545 RPL5P34-001 processed_pseudogene Homo_sapiens 0 1081
ENST00000434805 RPL5P4-001 processed_pseudogene Homo_sapiens 0 1002
ENST00000437011 RPL5P27-001 processed_pseudogene Homo_sapiens 0 680
ENST00000438138 RPL5P26-001 processed_pseudogene Homo_sapiens 0 824
ENST00000441148 RPL5P25-001 processed_pseudogene Homo_sapiens 0 848
ENST00000448118 RPL5P9-001 processed_pseudogene Homo_sapiens 0 976
ENST00000454085 RPL5P32-001 processed_pseudogene Homo_sapiens 0 900
ENST00000457507 RP11-234N17.1-001 processed_pseudogene Homo_sapiens 0 315
ENST00000460716 RPL5P1-001 processed_pseudogene Homo_sapiens 0 1061
ENST00000461952 RPL5-004 retained_intron Homo_sapiens 0 431
ENST00000463742 RPL5P24-001 processed_pseudogene Homo_sapiens 0 952
ENST00000465511 RPL5P30-001 processed_pseudogene Homo_sapiens 0 1022
ENST00000469685 RPL5P17-001 processed_pseudogene Homo_sapiens 0 902
ENST00000470843 RPL5-003 nonsense_mediated_decay Homo_sapiens 0 394
ENST00000477071 RPL5P12-001 processed_pseudogene Homo_sapiens 0 896
ENST00000478870 AP000797.2-001 processed_pseudogene Homo_sapiens 0 366
ENST00000482972 RPL5P29-001 processed_pseudogene Homo_sapiens 0 965
ENST00000487833 RPL5P33-001 processed_pseudogene Homo_sapiens 0 752
ENST00000493817 RPL5P3-001 processed_pseudogene Homo_sapiens 0 1018
ENST00000496040 RPL5P23-001 processed_pseudogene Homo_sapiens 0 874
ENST00000497519 RPL5-005 retained_intron Homo_sapiens 0 507
ENST00000498068 RPL5P11-001 processed_pseudogene Homo_sapiens 0 411
ENST00000600819 RP11-369G6.2-001 processed_pseudogene Homo_sapiens 0 640

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