C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: translocated promoter region, nuclear basket protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119161 Tpr-001 ENSMUSG00000006005 10090 + 1:150393250-150449935 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000119161
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000119161 4.053±0.30 15.469±5.41 2.539±0.00 4.349±1.44 12.816±5.35 5.941±1.25 2.006±0.17 2.818±0.43 3.265±1.18 9.654±4.12 8.627±5.54 4.085±1.20 1.244±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005635 IDA nuclear envelope

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367478 TPR-001 protein_coding Homo_sapiens 0 8643
ENST00000451586 TPR-003 protein_coding Homo_sapiens 0 311
ENST00000467810 TPR-008 processed_transcript Homo_sapiens 0 634
ENST00000469463 TPR-005 retained_intron Homo_sapiens 0 399
ENST00000474852 TPR-002 processed_transcript Homo_sapiens 0 2832
ENST00000481347 TPR-006 retained_intron Homo_sapiens 0 540
ENST00000491783 TPR-004 retained_intron Homo_sapiens 0 968
ENST00000492973 TPR-007 retained_intron Homo_sapiens 0 331
ENST00000613151 TPR-201 protein_coding Homo_sapiens 0 2619

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