C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 13475
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119290 Gm13475-001 ENSMUSG00000081830 10090 + 2:45329232-45329465 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENSMUST00000119290
Transcript ID Heart
ENSMUST00000119290 0.617±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L9 CIL_0007L9_0005 UCNEbase 2:43782078-47834434
CIL_0008RV CIL_0008RV_0002 VISTA 2:44736258-45337036
CIL_000944 CIL_000944_0002 VISTA 2:44802219-45404360
CIL_0008FM CIL_0008FM_0002 VISTA 2:44871143-45472955
CIL_0007GY CIL_0007GY_0002 CGP 2:44983634-48903269

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308769 RFWD2-010 protein_coding Homo_sapiens 0 305
ENST00000367666 RFWD2-003 protein_coding Homo_sapiens 0 311
ENST00000367667 RFWD2-002 nonsense_mediated_decay Homo_sapiens 0 207
ENST00000367669 RFWD2-001 protein_coding Homo_sapiens 0 327
ENST00000474194 RFWD2-006 nonsense_mediated_decay Homo_sapiens 5e-26 122
ENST00000491600 RFWD2-007 nonsense_mediated_decay Homo_sapiens 0 211
ENST00000498306 RFWD2-009 protein_coding Homo_sapiens 0 327
ENST00000579008 RFWD2P1-001 processed_pseudogene Homo_sapiens 0 248

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