C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13604
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119332 Gm13604-001 ENSMUSG00000083910 10090 - 2:67707290-67707771 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119332
Transcript ID Adipose Adrenal Bladder Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119332 0.171±0.04 0.302±0.00 0.056±0.03 0.173±0.00 0.161±0.00 0.107±0.00 0.149±0.13 0.144±0.00 0.278±0.17 0.244±0.08 0.173±0.09 0.268±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000HO CIL_0000HO_0002 CGP 2:67446002-68122689
CIL_00063B CIL_00063B_0002 CGP 2:67565871-68472268

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272274 RPL21-003 protein_coding Homo_sapiens 0 566
ENST00000311549 RPL21-001 protein_coding Homo_sapiens 0 566
ENST00000319826 RPL21-004 protein_coding Homo_sapiens 0 566
ENST00000326092 RPL21-005 protein_coding Homo_sapiens 0 566
ENST00000396599 RPL21P75-001 processed_pseudogene Homo_sapiens 0 556
ENST00000401964 RP11-569A2.2-001 processed_pseudogene Homo_sapiens 7e-28 126
ENST00000403842 RP11-203F10.6-001 processed_pseudogene Homo_sapiens 0 518
ENST00000415692 RP11-248J23.5-001 processed_pseudogene Homo_sapiens 0 388
ENST00000416622 RP11-329A14.2-001 processed_pseudogene Homo_sapiens 0 409
ENST00000418441 RP11-151F5.2-001 processed_pseudogene Homo_sapiens 0 520
ENST00000423231 RP11-26H16.1-001 processed_pseudogene Homo_sapiens 0 496
ENST00000439130 RP11-244N20.7-001 processed_pseudogene Homo_sapiens 0 396
ENST00000441274 RP11-490K7.1-001 processed_pseudogene Homo_sapiens 0 388
ENST00000453468 RPL21P134-001 processed_pseudogene Homo_sapiens 0 512
ENST00000459863 RPL21P41-001 processed_pseudogene Homo_sapiens 0 279
ENST00000461458 RPL21P11-001 processed_pseudogene Homo_sapiens 0 523
ENST00000461690 RPL21-007 nonsense_mediated_decay Homo_sapiens 0 540
ENST00000463655 CTC-209L16.1-001 processed_pseudogene Homo_sapiens 0 335
ENST00000465598 RPL21P71-001 processed_pseudogene Homo_sapiens 6e-22 108
ENST00000466550 RPL21-006 retained_intron Homo_sapiens 0 320
ENST00000471393 RP11-400K9.1-001 processed_pseudogene Homo_sapiens 0 392
ENST00000472300 RP11-16F15.2-001 processed_pseudogene Homo_sapiens 0 529
ENST00000473558 RPL21-002 retained_intron Homo_sapiens 2.00386e-43 180
ENST00000473808 RP11-254G11.1-001 processed_pseudogene Homo_sapiens 0 488
ENST00000477341 RP11-734J24.1-001 processed_pseudogene Homo_sapiens 0 531
ENST00000479116 RP11-73B8.1-001 processed_pseudogene Homo_sapiens 0 448
ENST00000482506 RPL21P116-001 processed_pseudogene Homo_sapiens 0 496
ENST00000483765 RPL21-008 nonsense_mediated_decay Homo_sapiens 3e-20 102
ENST00000485147 RP11-407P2.1-001 processed_pseudogene Homo_sapiens 0 501
ENST00000485945 RP11-613M5.2-001 processed_pseudogene Homo_sapiens 0 534
ENST00000486753 RP11-48B14.1-001 processed_pseudogene Homo_sapiens 0 518
ENST00000488289 RP13-585F24.1-001 processed_pseudogene Homo_sapiens 0 534
ENST00000491435 RP11-50D9.1-001 processed_pseudogene Homo_sapiens 0 540
ENST00000493317 RPL21-009 protein_coding Homo_sapiens 0 446
ENST00000493466 RP11-9D8.1-001 processed_pseudogene Homo_sapiens 0 473
ENST00000495531 RP11-572P18.1-001 processed_pseudogene Homo_sapiens 0 562
ENST00000497298 RPL21P131-001 processed_pseudogene Homo_sapiens 0 496
ENST00000497954 RPL21P4-001 processed_pseudogene Homo_sapiens 0 475
ENST00000510061 AC006445.7-001 processed_pseudogene Homo_sapiens 0 407
ENST00000515262 HSPA4L-005 processed_transcript Homo_sapiens 0 237
ENST00000557463 RPL21P7-001 processed_pseudogene Homo_sapiens 0 457
ENST00000559810 RPL21P12-001 processed_pseudogene Homo_sapiens 0 322
ENST00000610672 MED22-007 protein_coding Homo_sapiens 0 399

Loading