C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Son DNA binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119368 Son-003 ENSMUSG00000022961 10090 + 16:91647879-91665708 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverOvaryPlacentaENSMUST00000119368
Transcript ID Adipose Adrenal Brain Breast Colon Liver Ovary Placenta
ENSMUST00000119368 7.556±0.00 16.888±0.00 31.134±0.00 22.722±11.91 13.206±2.32 7.045±2.12 36.861±15.36 17.597±8.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000466 CIL_000466_0002 CGP 16:91621186-91679221
CIL_00037O CIL_00037O_0002 CGP 16:91647506-91688765

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0050733 IPI RS domain binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300278 SON-003 protein_coding Homo_sapiens 0 5299
ENST00000356577 SON-001 protein_coding Homo_sapiens 0 5299
ENST00000381679 SON-006 protein_coding Homo_sapiens 0 5297
ENST00000381692 SON-002 protein_coding Homo_sapiens 0 787
ENST00000421541 SON-008 protein_coding Homo_sapiens 0 1134
ENST00000435919 RP11-367J7.4-001 processed_pseudogene Homo_sapiens 0 763
ENST00000436227 SON-007 protein_coding Homo_sapiens 0 2525
ENST00000455528 SON-004 nonsense_mediated_decay Homo_sapiens 0 5299
ENST00000475072 SON-010 retained_intron Homo_sapiens 0 379
ENST00000492229 SON-011 processed_transcript Homo_sapiens 0 374

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