C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 4918
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119420 Gm4918-001 ENSMUSG00000083960 10090 + X:146095376-146096459 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENSMUST00000119420
Transcript ID Brain Testis
ENSMUST00000119420 0.032±0.00 0.161±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000718 CIL_000718_0002 CGP X:145446425-147197277

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000054987 actb1-001 protein_coding Danio_rerio 0 645
ENSDART00000133319 actb1-005 protein_coding Danio_rerio 0 444
ENSDART00000141407 actb1-002 protein_coding Danio_rerio 0 353
ENSDART00000148067 actb1-003 processed_transcript Danio_rerio 0 335
ENST00000290378 ACTC1-001 protein_coding Homo_sapiens 0 508
ENST00000345517 ACTG2-001 protein_coding Homo_sapiens 0 503
ENST00000356920 POTEE-001 protein_coding Homo_sapiens 0 647
ENST00000357462 POTEF-201 protein_coding Homo_sapiens 0 647
ENST00000397487 POTEKP-001 unprocessed_pseudogene Homo_sapiens 0 625
ENST00000403258 ACTBP8-001 processed_pseudogene Homo_sapiens 0 564
ENST00000409602 POTEJ-001 protein_coding Homo_sapiens 0 630
ENST00000409624 ACTG2-002 protein_coding Homo_sapiens 0 503
ENST00000409731 ACTG2-008 protein_coding Homo_sapiens 0 503
ENST00000409914 POTEF-001 protein_coding Homo_sapiens 0 647
ENST00000428275 ACTG1P10-001 processed_pseudogene Homo_sapiens 0 366
ENST00000438902 ACTG2-005 nonsense_mediated_decay Homo_sapiens 0 503
ENST00000441772 AC139143.2-001 processed_pseudogene Homo_sapiens 0 230
ENST00000451531 POTEI-001 protein_coding Homo_sapiens 0 636

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