C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12852
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119478 Gm12852-001 ENSMUSG00000081733 10090 - 4:99103060-99103778 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungOvaryPlacentaTestisENSMUST00000119478
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENSMUST00000119478 0.066±0.01 0.050±0.00 0.445±0.00 0.134±0.00 0.185±0.06 0.054±0.00 0.053±0.03 0.107±0.00 0.163±0.15 0.124±0.01 0.074±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002G2 CIL_0002G2_0002 CGP 4:98923810-99120915
CIL_000051 CIL_000051_0003 CGP 4:98936665-99120915
CIL_0008H9 CIL_0008H9_0002 VISTA 4:98994411-99595982
CIL_0002G5 CIL_0002G5_0002 CGP 4:99030954-99259787
CIL_00085L CIL_00085L_0002 VISTA 4:99053164-99654624
CIL_00089A CIL_00089A_0002 VISTA 4:99074142-99675600

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316084 RPS4X-001 protein_coding Homo_sapiens 0 675
ENST00000405151 RPS4XP9-001 processed_pseudogene Homo_sapiens 0 483
ENST00000406274 RPS4XP7-001 processed_pseudogene Homo_sapiens 0 593
ENST00000427198 RPS4XP16-001 transcribed_processed_pseudogene Homo_sapiens 0 569
ENST00000443195 RPS4XP4-001 processed_pseudogene Homo_sapiens 0 442
ENST00000446897 RPS4XP11-001 processed_pseudogene Homo_sapiens 0 588
ENST00000458402 RPS4XP2-001 processed_pseudogene Homo_sapiens 0 645
ENST00000460237 RPS4XP19-001 processed_pseudogene Homo_sapiens 0 451
ENST00000465034 RPS4XP10-001 processed_pseudogene Homo_sapiens 0 431
ENST00000470671 RPS4X-004 processed_transcript Homo_sapiens 0 268
ENST00000477670 RPS4XP6-001 processed_pseudogene Homo_sapiens 0 568
ENST00000479057 RPS4XP17-001 processed_pseudogene Homo_sapiens 0 566
ENST00000483219 RPS4XP13-001 processed_pseudogene Homo_sapiens 0 593
ENST00000486733 RPS4X-003 processed_transcript Homo_sapiens 0 460
ENST00000505751 RPS4XP20-001 processed_pseudogene Homo_sapiens 0 466
ENST00000508013 RP11-697N18.1-001 unprocessed_pseudogene Homo_sapiens 0 555
ENST00000595905 RPS4XP16-003 processed_transcript Homo_sapiens 0 569

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