C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15573
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119487 Gm15573-001 ENSMUSG00000080759 10090 + 6:53045884-53046423 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonLiverLungOvaryTestisENSMUST00000119487
Transcript ID Adipose Bladder Brain Breast Colon Liver Lung Ovary Testis
ENSMUST00000119487 0.331±0.00 0.040±0.00 0.108±0.00 0.366±0.00 0.271±0.00 0.125±0.08 0.253±0.13 0.057±0.00 0.354±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091R CIL_00091R_0002 VISTA 6:52667026-53269651
CIL_0003ZI CIL_0003ZI_0002 CGP 6:52713729-53068631
CIL_0003ZL CIL_0003ZL_0002 CGP 6:52768797-53696007

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300087 DCTN5-001 protein_coding Homo_sapiens 0 641
ENST00000421214 RP5-1059H15.1-001 processed_pseudogene Homo_sapiens 0 497
ENST00000563188 DCTN5-006 nonsense_mediated_decay Homo_sapiens 0 385
ENST00000563998 DCTN5-009 protein_coding Homo_sapiens 0 569
ENST00000566053 DCTN5-008 nonsense_mediated_decay Homo_sapiens 0 350
ENST00000566298 DCTN5-004 protein_coding Homo_sapiens 0 466
ENST00000568272 DCTN5-003 protein_coding Homo_sapiens 3e-35 152
ENST00000568589 DCTN5-005 protein_coding Homo_sapiens 0 571

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