C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L36, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119508 Rpl36-ps1-001 ENSMUSG00000081318 10090 + 11:116504536-116504838 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderOvaryPlacentaENSMUST00000119508
Transcript ID Bladder Ovary Placenta
ENSMUST00000119508 0.065±0.00 0.289±0.00 0.038±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0002 VISTA 11:116019003-116619995
CIL_00009I CIL_00009I_0002 CGP 11:116470845-116536674

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000347512 RPL36-003 protein_coding Homo_sapiens 7e-23 111
ENST00000394580 RPL36-004 protein_coding Homo_sapiens 6e-23 111
ENST00000577222 RPL36-001 protein_coding Homo_sapiens 9e-23 111
ENST00000579446 RPL36-007 protein_coding Homo_sapiens 0.00000000000001 84
ENST00000579649 RPL36-006 protein_coding Homo_sapiens 5e-23 111
ENST00000590786 RPL36-008 retained_intron Homo_sapiens 0.00002 55

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