C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 16074
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119524 Gm16074-001 ENSMUSG00000082247 10090 + 10:3992371-3992814 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverPlacentaTestisENSMUST00000119524
Transcript ID Bladder Brain Breast Liver Placenta Testis
ENSMUST00000119524 0.187±0.00 0.068±0.01 0.390±0.00 0.068±0.03 0.108±0.05 0.112±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ED CIL_0005ED_0002 CGP 10:3740364-4167081
CIL_0005EE CIL_0005EE_0002 CGP 10:3973118-4359468

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314289 RNF4-001 protein_coding Homo_sapiens 0 396
ENST00000502316 RNF4-008 protein_coding Homo_sapiens 0 396
ENST00000506706 RNF4-003 protein_coding Homo_sapiens 0 396
ENST00000508235 RNF4-022 nonsense_mediated_decay Homo_sapiens 0 200
ENST00000509388 RNF4-007 processed_transcript Homo_sapiens 0 372
ENST00000511600 RNF4-005 protein_coding Homo_sapiens 0 396
ENST00000511843 RNF4-011 processed_transcript Homo_sapiens 0 322
ENST00000513284 RNF4-019 nonsense_mediated_decay Homo_sapiens 0.0000000000005 79
ENST00000513643 RNF4-018 processed_transcript Homo_sapiens 0 207

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