C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15921
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119542 Gm15921-001 ENSMUSG00000094092 10090 - 5:130208080-130208562 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119542
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119542 0.467±0.00 0.756±0.06 0.871±0.00 0.540±0.00 0.717±0.18 1.066±0.00 0.170±0.05 0.205±0.07 0.322±0.10 0.849±0.28 0.086±0.02 1.073±0.58 0.292±0.17 0.176±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UP CIL_0005UP_0002 CGP 5:130144861-130214342
CIL_000256 CIL_000256_0002 CGP 5:130171798-130243765

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272274 RPL21-003 protein_coding Homo_sapiens 0 555
ENST00000311549 RPL21-001 protein_coding Homo_sapiens 0 555
ENST00000319826 RPL21-004 protein_coding Homo_sapiens 0 555
ENST00000326092 RPL21-005 protein_coding Homo_sapiens 0 555
ENST00000396599 RPL21P75-001 processed_pseudogene Homo_sapiens 0 549
ENST00000397467 RPL21P17-001 processed_pseudogene Homo_sapiens 0 481
ENST00000398929 AC009414.1-001 processed_pseudogene Homo_sapiens 0 285
ENST00000401418 RPL21P28-001 processed_pseudogene Homo_sapiens 0 538
ENST00000402896 RPL21P67-001 processed_pseudogene Homo_sapiens 0 372
ENST00000403842 RP11-203F10.6-001 processed_pseudogene Homo_sapiens 0 510
ENST00000404609 RP3-393E18.1-001 processed_pseudogene Homo_sapiens 0 477
ENST00000406094 RPL21P65-001 processed_pseudogene Homo_sapiens 0 339
ENST00000413752 RPL21P24-001 processed_pseudogene Homo_sapiens 0 276
ENST00000416622 RP11-329A14.2-001 processed_pseudogene Homo_sapiens 0 412
ENST00000418441 RP11-151F5.2-001 processed_pseudogene Homo_sapiens 0 499
ENST00000422509 RP11-405L18.4-001 processed_pseudogene Homo_sapiens 0 411
ENST00000423231 RP11-26H16.1-001 processed_pseudogene Homo_sapiens 0 494
ENST00000427200 AC009414.1-001 processed_pseudogene Homo_sapiens 0 285
ENST00000432935 RP5-1068B5.1-001 processed_pseudogene Homo_sapiens 0.0000005 58
ENST00000439130 RP11-244N20.7-001 processed_pseudogene Homo_sapiens 0 390
ENST00000441274 RP11-490K7.1-001 processed_pseudogene Homo_sapiens 0 388
ENST00000443666 RPL21P133-001 processed_pseudogene Homo_sapiens 0 342
ENST00000446654 RPL21P23-001 processed_pseudogene Homo_sapiens 0 292
ENST00000453468 RPL21P134-001 processed_pseudogene Homo_sapiens 0 494
ENST00000454107 RP11-57G10.1-001 processed_pseudogene Homo_sapiens 0 364
ENST00000454675 AC092155.1-001 processed_pseudogene Homo_sapiens 0 488
ENST00000460608 CTD-2301A4.3-001 processed_pseudogene Homo_sapiens 0 401
ENST00000461458 RPL21P11-001 processed_pseudogene Homo_sapiens 0 516
ENST00000461690 RPL21-007 nonsense_mediated_decay Homo_sapiens 0 527
ENST00000465598 RPL21P71-001 processed_pseudogene Homo_sapiens 0 259
ENST00000466550 RPL21-006 retained_intron Homo_sapiens 0 327
ENST00000471393 RP11-400K9.1-001 processed_pseudogene Homo_sapiens 0 370
ENST00000472093 RP11-267J23.1-001 processed_pseudogene Homo_sapiens 0 348
ENST00000472300 RP11-16F15.2-001 processed_pseudogene Homo_sapiens 0 538
ENST00000473558 RPL21-002 retained_intron Homo_sapiens 0 191
ENST00000473808 RP11-254G11.1-001 processed_pseudogene Homo_sapiens 0 472
ENST00000477341 RP11-734J24.1-001 processed_pseudogene Homo_sapiens 0 507
ENST00000482506 RPL21P116-001 processed_pseudogene Homo_sapiens 0 499
ENST00000482905 RPL21P120-001 processed_pseudogene Homo_sapiens 0 486
ENST00000483765 RPL21-008 nonsense_mediated_decay Homo_sapiens 4e-24 115
ENST00000485147 RP11-407P2.1-001 processed_pseudogene Homo_sapiens 0 503
ENST00000485217 CTD-2182N23.1-001 processed_pseudogene Homo_sapiens 0 303
ENST00000485945 RP11-613M5.2-001 processed_pseudogene Homo_sapiens 0 525
ENST00000486753 RP11-48B14.1-001 processed_pseudogene Homo_sapiens 0 510
ENST00000488289 RP13-585F24.1-001 processed_pseudogene Homo_sapiens 0 521
ENST00000491435 RP11-50D9.1-001 processed_pseudogene Homo_sapiens 0 531
ENST00000493028 RPL21P123-001 transcribed_processed_pseudogene Homo_sapiens 0 287
ENST00000493317 RPL21-009 protein_coding Homo_sapiens 0 436
ENST00000493466 RP11-9D8.1-001 processed_pseudogene Homo_sapiens 0 472
ENST00000495531 RP11-572P18.1-001 processed_pseudogene Homo_sapiens 0 555
ENST00000497298 RPL21P131-001 processed_pseudogene Homo_sapiens 0 494
ENST00000497954 RPL21P4-001 processed_pseudogene Homo_sapiens 0 479
ENST00000510061 AC006445.7-001 processed_pseudogene Homo_sapiens 0 394
ENST00000515262 HSPA4L-005 processed_transcript Homo_sapiens 0 243
ENST00000557463 RPL21P7-001 processed_pseudogene Homo_sapiens 0 460
ENST00000559810 RPL21P12-001 processed_pseudogene Homo_sapiens 0 331
ENST00000600955 RP1-228H13.1-001 processed_pseudogene Homo_sapiens 0 479
ENST00000610672 MED22-007 protein_coding Homo_sapiens 0 390

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