C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: akirin 1, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119676 Akirin1-ps-001 ENSMUSG00000080791 10090 + 11:85216597-85217054 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000119676
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000119676 0.155±0.00 0.166±0.00 0.119±0.03 0.323±0.12 0.212±0.07 0.168±0.06 0.123±0.00 0.157±0.06 0.133±0.00 0.380±0.03 0.321±0.07 0.206±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000701 CIL_000701_0002 CGP 11:85170404-85235130
CIL_000704 CIL_000704_0002 CGP 11:85187262-85347066

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372984 AKIRIN1-005 protein_coding Homo_sapiens 9.94922e-44 180
ENST00000432648 AKIRIN1-001 protein_coding Homo_sapiens 0 460
ENST00000446189 AKIRIN1-004 protein_coding Homo_sapiens 0 333
ENST00000531822 AKIRIN1-007 protein_coding Homo_sapiens 0 377

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