C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5909
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119768 Gm5909-001 ENSMUSG00000082491 10090 - 8:80110806-80112086 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000119768
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000119768 0.047±0.01 0.749±0.21 0.105±0.00 0.130±0.00 0.041±0.00 0.060±0.02 0.088±0.10 0.045±0.01 0.107±0.13 0.072±0.07 0.424±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YN CIL_0008YN_0002 VISTA 8:79537628-80138676
CIL_0007O9 CIL_0007O9_0002 UCNEbase 8:79748250-80315212
CIL_0008YM CIL_0008YM_0002 VISTA 8:79755435-80357135
CIL_0008YO CIL_0008YO_0002 VISTA 8:80014046-80615940

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337859 ZC3H15-001 protein_coding Homo_sapiens 0 1668
ENST00000421536 ZC3H15-002 nonsense_mediated_decay Homo_sapiens 0 590
ENST00000468120 ZC3H15-004 processed_transcript Homo_sapiens 0 579
ENST00000481101 ZC3H15-003 processed_transcript Homo_sapiens 0 473
ENST00000496289 ZC3H15-005 processed_transcript Homo_sapiens 0 582
ENST00000498757 ZC3H15-008 retained_intron Homo_sapiens 0 689

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