C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S12, pseudogene 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119773 Rps12-ps19-001 ENSMUSG00000082481 10090 - 11:75070814-75071213 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119773
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119773 0.903±0.65 0.506±0.28 1.434±0.56 0.548±0.25 0.710±0.48 0.177±0.06 0.696±0.22 0.707±0.27 0.734±0.24 0.215±0.06 1.588±1.04 0.807±0.74 0.409±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RP CIL_0007RP_0002 VISTA 11:74746156-75348336
CIL_00093G CIL_00093G_0002 VISTA 11:74749027-75350435
CIL_0007KQ CIL_0007KQ_0002 UCNEbase 11:75016990-75215448

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000230050 RPS12-001 protein_coding Homo_sapiens 0 529
ENST00000407698 RP11-812I20.2-001 processed_pseudogene Homo_sapiens 0 303
ENST00000414823 AC009413.2-001 processed_pseudogene Homo_sapiens 0 479
ENST00000415024 RP11-313E4.1-001 processed_pseudogene Homo_sapiens 0 303
ENST00000419579 RPS12P23-001 processed_pseudogene Homo_sapiens 0 462
ENST00000428553 RP11-864N7.2-001 processed_pseudogene Homo_sapiens 0 523
ENST00000440335 RP11-613F7.1-001 processed_pseudogene Homo_sapiens 0 473
ENST00000442381 RPS12P18-001 processed_pseudogene Homo_sapiens 0 303
ENST00000451515 AC010733.5-001 processed_pseudogene Homo_sapiens 0 390
ENST00000461060 RP11-621K7.1-001 processed_pseudogene Homo_sapiens 0 449
ENST00000463278 CTC-398G3.2-001 processed_pseudogene Homo_sapiens 0 494
ENST00000484182 RP11-538P18.1-001 processed_pseudogene Homo_sapiens 0 204
ENST00000484616 RPS12-002 retained_intron Homo_sapiens 0 342
ENST00000492017 RPS12P26-001 transcribed_processed_pseudogene Homo_sapiens 0 442
ENST00000497190 RP11-477G18.1-001 processed_pseudogene Homo_sapiens 0 337
ENST00000616756 RP11-174N3.4-001 processed_pseudogene Homo_sapiens 0 204

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