Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	predicted gene 11539
ENSMUST00000119837	Gm11539-001	ENSMUSG00000083337	10090	+	11:96248633-96249189	processed_pseudogene

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Kidney	Liver	Lung	Ovary	Placenta	Testis
ENSMUST00000119837	0.095±0.00	2.958±0.29	0.699±0.44	0.608±0.09	0.198±0.00	1.137±0.34	1.306±0.52	0.419±0.48	0.092±0.00	0.779±0.52	0.184±0.18	0.163±0.05

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0007ZM	CIL_0007ZM_0002	VISTA	11:95992065-96592579

Gene Ontology
GO ID	Evidence Type	GO Description
No GO terms available.

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENST00000084795	RPL18-006	protein_coding	Homo_sapiens	0	580
ENST00000422478	RP11-709P2.1-001	processed_pseudogene	Homo_sapiens	0	302
ENST00000478088	RPL18P13-001	processed_pseudogene	Homo_sapiens	0	497
ENST00000486306	RP11-313M3.1-001	processed_pseudogene	Homo_sapiens	0	267
ENST00000497218	RP11-286B5.1-001	processed_pseudogene	Homo_sapiens	3e-36	156
ENST00000547892	RPL18-003	retained_intron	Homo_sapiens	2e-24	119
ENST00000547897	RPL18-010	non_stop_decay	Homo_sapiens	0	279
ENST00000549273	RPL18-014	protein_coding	Homo_sapiens	0	488
ENST00000549370	RPL18-009	nonsense_mediated_decay	Homo_sapiens	0	549
ENST00000549920	RPL18-001	protein_coding	Homo_sapiens	0	584
ENST00000550645	RPL18-012	protein_coding	Homo_sapiens	0	281
ENST00000550671	RPL18-007	retained_intron	Homo_sapiens	4e-26	122
ENST00000550973	RPL18-013	protein_coding	Homo_sapiens	0	545
ENST00000551749	RPL18-004	retained_intron	Homo_sapiens	0	213
ENST00000552347	RPL18-005	retained_intron	Homo_sapiens	0	213
ENST00000552705	RPL18-002	retained_intron	Homo_sapiens	0	285

Loading