C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 5721
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119845 Gm5721-001 ENSMUSG00000081744 10090 + 6:16925231-16926926 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000119845
Transcript ID Liver
ENSMUST00000119845 0.003±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007K6 CIL_0007K6_0003 UCNEbase 6:14952789-16992593
CIL_0008E4 CIL_0008E4_0002 VISTA 6:16425956-17029599
CIL_0007VN CIL_0007VN_0002 VISTA 6:16535376-17135875
CIL_00040R CIL_00040R_0002 CGP 6:16833381-17105828
CIL_0007SP CIL_0007SP_0002 VISTA 6:16868699-17474875

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000236959 ATIC-001 protein_coding Homo_sapiens 0 745
ENST00000426233 ATIC-013 protein_coding Homo_sapiens 0 536
ENST00000435675 ATIC-007 protein_coding Homo_sapiens 0 745
ENST00000442048 ATIC-015 protein_coding Homo_sapiens 3.9937e-43 178
ENST00000443953 ATIC-002 nonsense_mediated_decay Homo_sapiens 0 745
ENST00000446622 ATIC-012 protein_coding Homo_sapiens 0 429
ENST00000467388 ATIC-014 retained_intron Homo_sapiens 0 388
ENST00000478734 ATIC-003 retained_intron Homo_sapiens 1.99965e-42 176
ENST00000479093 ATIC-016 retained_intron Homo_sapiens 0 556

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