C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal L1 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119953 Rsl1d1-001 ENSMUSG00000005846 10090 - 16:11192970-11203331 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119953
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119953 7.267±1.96 2.030±0.34 25.263±3.20 19.608±8.06 5.194±1.94 3.231±0.52 6.730±0.56 5.447±1.39 19.661±18.06 4.668±0.41 17.431±0.90 10.561±11.91 32.904±11.80 5.067±0.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DT CIL_0007DT_0002 CGP 16:11136592-11203331
CIL_0001KD CIL_0001KD_0002 CGP 16:11192970-11254270

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001649 IEA osteoblast differentiation
GO:0005515 IPI protein binding
GO:0005730 IDA nucleolus
GO:0016020 IEA membrane
GO:0032880 ISO regulation of protein localization
GO:0042981 ISS regulation of apoptotic process
GO:0044822 IEA poly(A) RNA binding
GO:2000772 ISS regulation of cellular senescence

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000442109 RP11-213G2.5-001 processed_pseudogene Homo_sapiens 0 322

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