C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tetraspanin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119993 Tspan5-003 ENSMUSG00000028152 10090 + 3:138809874-138903674 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000119993
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000119993 9.509±0.00 2.786±0.57 0.556±0.23 0.311±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LO CIL_0008LO_0002 VISTA 3:138442669-139045155

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000305798 TSPAN5-001 protein_coding Homo_sapiens 0 1077
ENST00000505184 TSPAN5-004 protein_coding Homo_sapiens 0 1075
ENST00000507167 TSPAN5-010 retained_intron Homo_sapiens 0 268
ENST00000508798 TSPAN5-002 nonsense_mediated_decay Homo_sapiens 0 501
ENST00000509168 TSPAN5-007 processed_transcript Homo_sapiens 0 678
ENST00000511651 TSPAN5-005 protein_coding Homo_sapiens 0 436
ENST00000511753 TSPAN5-003 retained_intron Homo_sapiens 0 809
ENST00000511800 TSPAN5-008 nonsense_mediated_decay Homo_sapiens 0 270
ENST00000515287 TSPAN5-006 protein_coding Homo_sapiens 0 660
ENST00000515440 TSPAN5-009 nonsense_mediated_decay Homo_sapiens 0 431

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