C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleckstrin homology domain containing, family G (with RhoGef domain) member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120274 Plekhg1-001 ENSMUSG00000040624 10090 + 10:3740364-3967303 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120274
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120274 2.345±0.04 0.630±0.24 1.710±0.09 1.631±0.59 1.098±0.34 0.891±0.32 1.149±0.41 1.460±0.52 0.622±0.30 2.843±0.24 0.298±0.17 0.882±0.26 3.652±1.98 0.560±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005OK CIL_0005OK_0002 CGP 10:3540240-3967303
CIL_0005ED CIL_0005ED_0002 CGP 10:3740364-4167081

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0032321 IEA positive regulation of Rho GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358517 PLEKHG1-001 protein_coding Homo_sapiens 0 3025
ENST00000367328 PLEKHG1-201 protein_coding Homo_sapiens 0 3025
ENST00000475490 PLEKHG1-002 nonsense_mediated_decay Homo_sapiens 0 1157

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