C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S10, pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120308 Rps10-ps4-001 ENSMUSG00000083988 10090 - 5:147100562-147101053 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000120308
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000120308 0.414±0.09 0.214±0.00 0.483±0.10 0.288±0.12 0.460±0.30 0.390±0.00 0.089±0.00 0.521±0.25 0.181±0.10 0.503±0.29 0.628±0.39 0.119±0.02 0.203±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CO CIL_0008CO_0002 VISTA 5:146855041-147456530
CIL_00082E CIL_00082E_0002 VISTA 5:146922660-147524221
CIL_0007MT CIL_0007MT_0002 UCNEbase 5:146994099-147547626
CIL_0004M8 CIL_0004M8_0002 CGP 5:147016655-147111361
CIL_0004CM CIL_0004CM_0002 CGP 5:147077050-147190947

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326199 RPS10-001 protein_coding Homo_sapiens 0 483
ENST00000344700 RPS10-005 protein_coding Homo_sapiens 0 442
ENST00000393266 RP11-212P7.1-001 processed_pseudogene Homo_sapiens 0 279
ENST00000396982 AP000354.2-001 processed_pseudogene Homo_sapiens 0 318
ENST00000408001 RP3-375P9.2-001 processed_pseudogene Homo_sapiens 0 438
ENST00000439139 RP11-404O13.4-001 processed_pseudogene Homo_sapiens 0 388
ENST00000439253 RPS10P3-001 processed_pseudogene Homo_sapiens 0 436
ENST00000440748 RPS10P14-001 processed_pseudogene Homo_sapiens 0 375
ENST00000445867 CTA-268H5.9-001 processed_pseudogene Homo_sapiens 0 224
ENST00000456185 RP11-24H1.1-001 processed_pseudogene Homo_sapiens 0 285
ENST00000460492 RP11-464D20.2-001 processed_pseudogene Homo_sapiens 0 279
ENST00000464218 RPS10-004 processed_transcript Homo_sapiens 0 483
ENST00000467531 RPS10-003 processed_transcript Homo_sapiens 0 483
ENST00000467930 RP11-425L10.1-001 processed_pseudogene Homo_sapiens 0 483
ENST00000471205 RP11-215P8.1-001 processed_pseudogene Homo_sapiens 0 394
ENST00000477729 RP11-745A24.2-001 processed_pseudogene Homo_sapiens 0 455
ENST00000480396 RPS10P28-001 processed_pseudogene Homo_sapiens 0 436
ENST00000480942 RPS10-006 processed_transcript Homo_sapiens 0 303
ENST00000485426 RP11-435F17.1-001 processed_pseudogene Homo_sapiens 0 442
ENST00000492704 RPS10L-001 processed_pseudogene Homo_sapiens 0 233
ENST00000494077 RPS10-002 processed_transcript Homo_sapiens 0 483
ENST00000604757 GS1-21A4.2-001 processed_pseudogene Homo_sapiens 0 296
ENST00000605528 RPS10-NUDT3-001 protein_coding Homo_sapiens 0 442
ENST00000621356 RPS10-201 protein_coding Homo_sapiens 0 483

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