C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 9378
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120315 Gm9378-001 ENSMUSG00000082507 10090 + 11:87078787-87079257 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120315
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120315 0.799±0.40 0.908±0.48 0.716±0.09 1.177±0.37 2.262±1.00 2.167±1.25 0.819±0.52 0.597±0.18 0.788±0.41 1.132±0.25 0.119±0.03 2.564±1.47 0.294±0.16 0.626±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039L CIL_00039L_0002 CGP 11:87077732-87108708

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272274 RPL21-003 protein_coding Homo_sapiens 0 466
ENST00000311549 RPL21-001 protein_coding Homo_sapiens 0 466
ENST00000319826 RPL21-004 protein_coding Homo_sapiens 0 466
ENST00000326092 RPL21-005 protein_coding Homo_sapiens 0 466
ENST00000396599 RPL21P75-001 processed_pseudogene Homo_sapiens 0 460
ENST00000401418 RPL21P28-001 processed_pseudogene Homo_sapiens 0 460
ENST00000406094 RPL21P65-001 processed_pseudogene Homo_sapiens 0 315
ENST00000413752 RPL21P24-001 processed_pseudogene Homo_sapiens 0 196
ENST00000416622 RP11-329A14.2-001 processed_pseudogene Homo_sapiens 0 289
ENST00000422509 RP11-405L18.4-001 processed_pseudogene Homo_sapiens 0 346
ENST00000423231 RP11-26H16.1-001 processed_pseudogene Homo_sapiens 0 394
ENST00000436649 RP11-402L1.12-001 processed_pseudogene Homo_sapiens 0 278
ENST00000439130 RP11-244N20.7-001 processed_pseudogene Homo_sapiens 0 339
ENST00000441274 RP11-490K7.1-001 processed_pseudogene Homo_sapiens 0 337
ENST00000446654 RPL21P23-001 processed_pseudogene Homo_sapiens 0 233
ENST00000453468 RPL21P134-001 processed_pseudogene Homo_sapiens 0 416
ENST00000454107 RP11-57G10.1-001 processed_pseudogene Homo_sapiens 0 294
ENST00000454675 AC092155.1-001 processed_pseudogene Homo_sapiens 0 442
ENST00000459863 RPL21P41-001 processed_pseudogene Homo_sapiens 0 215
ENST00000460608 CTD-2301A4.3-001 processed_pseudogene Homo_sapiens 0 355
ENST00000461458 RPL21P11-001 processed_pseudogene Homo_sapiens 0 427
ENST00000461690 RPL21-007 nonsense_mediated_decay Homo_sapiens 0 462
ENST00000463605 RPL21P39-001 processed_pseudogene Homo_sapiens 0 422
ENST00000465598 RPL21P71-001 processed_pseudogene Homo_sapiens 0 239
ENST00000466550 RPL21-006 retained_intron Homo_sapiens 0 276
ENST00000472093 RP11-267J23.1-001 processed_pseudogene Homo_sapiens 0 254
ENST00000472300 RP11-16F15.2-001 processed_pseudogene Homo_sapiens 0 433
ENST00000473558 RPL21-002 retained_intron Homo_sapiens 7e-37 158
ENST00000473808 RP11-254G11.1-001 processed_pseudogene Homo_sapiens 0 436
ENST00000477341 RP11-734J24.1-001 processed_pseudogene Homo_sapiens 0 411
ENST00000479116 RP11-73B8.1-001 processed_pseudogene Homo_sapiens 0 368
ENST00000482506 RPL21P116-001 processed_pseudogene Homo_sapiens 0 422
ENST00000482905 RPL21P120-001 processed_pseudogene Homo_sapiens 0 383
ENST00000483765 RPL21-008 nonsense_mediated_decay Homo_sapiens 2e-22 110
ENST00000485147 RP11-407P2.1-001 processed_pseudogene Homo_sapiens 0 394
ENST00000485217 CTD-2182N23.1-001 processed_pseudogene Homo_sapiens 0 250
ENST00000485945 RP11-613M5.2-001 processed_pseudogene Homo_sapiens 0 449
ENST00000488305 RPL21P13-001 processed_pseudogene Homo_sapiens 0 340
ENST00000491435 RP11-50D9.1-001 processed_pseudogene Homo_sapiens 0 444
ENST00000493028 RPL21P123-001 transcribed_processed_pseudogene Homo_sapiens 0 246
ENST00000493317 RPL21-009 protein_coding Homo_sapiens 0 366
ENST00000493466 RP11-9D8.1-001 processed_pseudogene Homo_sapiens 0 414
ENST00000495531 RP11-572P18.1-001 processed_pseudogene Homo_sapiens 0 466
ENST00000497298 RPL21P131-001 processed_pseudogene Homo_sapiens 0 399
ENST00000510061 AC006445.7-001 processed_pseudogene Homo_sapiens 0 315
ENST00000515262 HSPA4L-005 processed_transcript Homo_sapiens 0 209
ENST00000519294 TG-012 processed_transcript Homo_sapiens 2e-17 94
ENST00000520197 TG-011 processed_transcript Homo_sapiens 3e-17 94
ENST00000557463 RPL21P7-001 processed_pseudogene Homo_sapiens 0 366
ENST00000559810 RPL21P12-001 processed_pseudogene Homo_sapiens 0 274
ENST00000600955 RP1-228H13.1-001 processed_pseudogene Homo_sapiens 0 409
ENST00000610672 MED22-007 protein_coding Homo_sapiens 0 339

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