C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15483
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120338 Gm15483-001 ENSMUSG00000081431 10090 - 7:133738479-133738934 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungMuscleOvaryPlacentaTestisENSMUST00000120338
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120338 0.141±0.04 0.156±0.00 0.662±0.30 0.137±0.02 0.219±0.10 0.459±0.30 0.151±0.08 0.186±0.06 0.183±0.08 0.261±0.12 0.244±0.09 0.135±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001V9 CIL_0001V9_0002 CGP 7:133709333-133782726
CIL_0001V8 CIL_0001V8_0002 CGP 7:133720942-133881532

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228140 RPS13-010 protein_coding Homo_sapiens 0 339
ENST00000437890 RPS13P2-001 processed_pseudogene Homo_sapiens 0 453
ENST00000448956 RP6-29D12.3-001 processed_pseudogene Homo_sapiens 1e-24 115
ENST00000458382 RP11-272G22.2-001 processed_pseudogene Homo_sapiens 5e-25 117
ENST00000525634 RPS13-001 protein_coding Homo_sapiens 0 499
ENST00000525828 RPS13-005 retained_intron Homo_sapiens 0 466
ENST00000526895 RPS13-002 processed_transcript Homo_sapiens 0 473
ENST00000528074 RPS13-004 retained_intron Homo_sapiens 2e-17 94
ENST00000531908 RPS13-008 retained_intron Homo_sapiens 0 329
ENST00000533969 RPS13-007 protein_coding Homo_sapiens 1.00053e-42 176
ENST00000534329 RPS13-003 retained_intron Homo_sapiens 2.00386e-43 180

Loading