C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cDNA sequence BC004004
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120346 BC004004-002 ENSMUSG00000052712 10090 + 17:29268843-29301521 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120346
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120346 34.171±7.01 7.441±1.40 12.370±1.08 11.449±4.74 26.324±8.17 8.391±4.60 23.269±7.49 32.363±9.54 7.848±2.04 14.775±4.94 22.101±4.89 18.093±4.75 10.648±4.70 12.353±5.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089L CIL_00089L_0002 VISTA 17:29133661-29735358
CIL_0002Y6 CIL_0002Y6_0002 CGP 17:29250803-29302881
CIL_0002Y9 CIL_0002Y9_0002 CGP 17:29268788-29329413

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 ISS cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005886 ISS plasma membrane
GO:0016021 IEA integral component of membrane
GO:0042060 ISS wound healing
GO:0045787 ISS positive regulation of cell cycle
GO:0050673 ISS epithelial cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355190 C6orf89-002 protein_coding Homo_sapiens 0 1227
ENST00000359359 C6orf89-001 protein_coding Homo_sapiens 0 1098
ENST00000373685 C6orf89-003 protein_coding Homo_sapiens 0 1099
ENST00000480824 C6orf89-004 protein_coding Homo_sapiens 0 1098

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