C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12136
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120460 Gm12136-001 ENSMUSG00000082390 10090 - 11:40569317-40570525 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverMuscleTestisENSMUST00000120460
Transcript ID Breast Liver Muscle Testis
ENSMUST00000120460 0.074±0.00 0.027±0.02 0.019±0.00 0.028±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000011878 eif4a1b-001 protein_coding Danio_rerio 0 451
ENSDART00000140602 eif4a1b-002 processed_transcript Danio_rerio 0 268
ENST00000293831 EIF4A1-001 protein_coding Homo_sapiens 0 1264
ENST00000396527 EIF4A1-003 retained_intron Homo_sapiens 2.94273e-44 183
ENST00000415667 EIF4A1P13-001 processed_pseudogene Homo_sapiens 2e-39 165
ENST00000422633 EIF4A1P2-001 processed_pseudogene Homo_sapiens 0 1219
ENST00000428062 EIF4A1P5-001 processed_pseudogene Homo_sapiens 0 917
ENST00000428832 EIF4A1P10-001 processed_pseudogene Homo_sapiens 0 1230
ENST00000448133 EIF4A1P6-001 processed_pseudogene Homo_sapiens 0 985
ENST00000550578 RP11-1136G11.6-001 processed_pseudogene Homo_sapiens 0 1107
ENST00000576035 EIF4A1P9-001 processed_pseudogene Homo_sapiens 0 1044
ENST00000577269 EIF4A1-007 protein_coding Homo_sapiens 0 1014
ENST00000577738 EIF4A1-016 retained_intron Homo_sapiens 0 346
ENST00000577929 EIF4A1-018 protein_coding Homo_sapiens 0 305
ENST00000578324 EIF4A1-009 retained_intron Homo_sapiens 0 996
ENST00000578476 EIF4A1-014 nonsense_mediated_decay Homo_sapiens 0 409
ENST00000578495 EIF4A1-026 protein_coding Homo_sapiens 0 878
ENST00000578754 EIF4A1-023 protein_coding Homo_sapiens 9.80909e-45 183
ENST00000579085 EIF4A1-019 retained_intron Homo_sapiens 3e-21 106
ENST00000579139 EIF4A1-013 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000580461 EIF4A1-002 nonsense_mediated_decay Homo_sapiens 0 346
ENST00000580886 EIF4A1-012 retained_intron Homo_sapiens 7e-22 108
ENST00000580888 EIF4A1-038 nonsense_mediated_decay Homo_sapiens 0 606
ENST00000581384 EIF4A1-037 protein_coding Homo_sapiens 0 625
ENST00000581544 EIF4A1-004 nonsense_mediated_decay Homo_sapiens 2.94273e-44 183
ENST00000581770 EIF4A1-015 protein_coding Homo_sapiens 0 233
ENST00000582169 EIF4A1-024 protein_coding Homo_sapiens 0 449
ENST00000582213 EIF4A1-021 retained_intron Homo_sapiens 0 283
ENST00000582746 EIF4A1-008 protein_coding Homo_sapiens 0 1014
ENST00000582848 EIF4A1-027 retained_intron Homo_sapiens 0 497
ENST00000583802 EIF4A1-022 protein_coding Homo_sapiens 0 545
ENST00000583899 EIF4A1-020 retained_intron Homo_sapiens 1e-20 104
ENST00000584054 EIF4A1-011 retained_intron Homo_sapiens 1.4013e-45 187
ENST00000584712 EIF4A1-036 retained_intron Homo_sapiens 0 364
ENST00000584784 EIF4A1-028 protein_coding Homo_sapiens 0 654
ENST00000584798 EIF4A1-010 retained_intron Homo_sapiens 2.94273e-44 183
ENST00000584860 EIF4A1-017 protein_coding Homo_sapiens 0 826
ENST00000584901 EIF4A1-006 retained_intron Homo_sapiens 0 531
ENST00000585024 EIF4A1-025 protein_coding Homo_sapiens 0 573
ENST00000614237 SENP3-EIF4A1-001 nonsense_mediated_decay Homo_sapiens 0 1264

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