C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15610
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120584 Gm15610-001 ENSMUSG00000078183 10090 + 5:8971948-8972142 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000120584
Transcript ID Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000120584 1.209±0.00 2.002±1.58 11.710±1.14 5.899±1.56 4.931±3.64 1.636±0.49 5.041±0.00 8.996±8.86 1.261±0.87 3.189±0.44

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000418558 RP11-340I6.4-001 processed_pseudogene Homo_sapiens 0 233
ENST00000420575 RP4-631H13.6-001 processed_pseudogene Homo_sapiens 0 237
ENST00000433132 RP1-159A19.3-001 processed_pseudogene Homo_sapiens 0 261
ENST00000434626 AC108059.2-001 processed_pseudogene Homo_sapiens 1e-34 148
ENST00000438370 CCDC51-006 protein_coding Homo_sapiens 2e-17 94
ENST00000438607 TMA7-001 protein_coding Homo_sapiens 0 289
ENST00000477624 TMA7-004 retained_intron Homo_sapiens 0 279
ENST00000479126 TMA7-003 retained_intron Homo_sapiens 9e-22 108
ENST00000520566 CTB-79E8.3-001 processed_pseudogene Homo_sapiens 0 267
ENST00000521201 CTC-308K20.4-001 processed_pseudogene Homo_sapiens 2e-32 141

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