C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12922
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120626 Gm12922-001 ENSMUSG00000081170 10090 - 4:123709219-123710027 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120626
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120626 0.362±0.17 0.274±0.07 0.122±0.07 2.483±3.31 0.282±0.11 0.231±0.16 0.148±0.16 0.150±0.06 2.098±6.19 0.176±0.08 0.082±0.00 0.200±0.11 0.130±0.02 0.085±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000990 CIL_000990_0002 VISTA 4:123304867-123907516
CIL_0001ZU CIL_0001ZU_0002 CGP 4:123349633-123718202
CIL_0007Q3 CIL_0007Q3_0002 VISTA 4:123648792-124248792
CIL_0008G7 CIL_0008G7_0002 VISTA 4:123690360-124291795

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393351 RP5-1106E3.1-001 processed_pseudogene Homo_sapiens 0 564
ENST00000428058 CTD-2666L21.2-001 processed_pseudogene Homo_sapiens 0 625
ENST00000433054 RP11-1O7.1-001 processed_pseudogene Homo_sapiens 0 577
ENST00000434010 RPS2P1-001 processed_pseudogene Homo_sapiens 0 621
ENST00000436136 RP11-16L9.1-001 processed_pseudogene Homo_sapiens 0 568
ENST00000438210 RP3-342P20.2-001 processed_pseudogene Homo_sapiens 0 604
ENST00000445918 RP11-388B24.4-001 processed_pseudogene Homo_sapiens 0 475
ENST00000457299 AC087163.2-001 processed_pseudogene Homo_sapiens 0 468
ENST00000468126 RP11-324J13.1-001 processed_pseudogene Homo_sapiens 0 592
ENST00000478038 RPS2P44-001 processed_pseudogene Homo_sapiens 0 486
ENST00000479476 RPS2P6-001 processed_pseudogene Homo_sapiens 0 564
ENST00000480705 RP11-296A18.5-001 processed_pseudogene Homo_sapiens 0 652
ENST00000488906 RP5-867C24.1-001 processed_pseudogene Homo_sapiens 0 566
ENST00000491725 RP11-810P12.1-001 processed_pseudogene Homo_sapiens 0 451
ENST00000492365 KB-1683C8.1-001 processed_pseudogene Homo_sapiens 0 597
ENST00000612648 CTB-75G16.1-001 processed_pseudogene Homo_sapiens 0 588

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