C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5883
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120735 Gm5883-001 ENSMUSG00000083713 10090 - 6:123218953-123219447 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLiverOvaryPlacentaTestisENSMUST00000120735
Transcript ID Bladder Brain Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000120735 0.115±0.05 0.029±0.02 0.232±0.00 0.114±0.01 0.114±0.09 0.258±0.22 0.292±0.27 0.099±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XR CIL_0003XR_000K CGP 6:123172893-123247021

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355968 PPIA-002 protein_coding Homo_sapiens 0 527
ENST00000358455 PPIAP22-001 processed_pseudogene Homo_sapiens 0 588
ENST00000369222 PPIAL4A-201 protein_coding Homo_sapiens 0 466
ENST00000395416 AC005522.6-001 processed_pseudogene Homo_sapiens 0 331
ENST00000403866 PPIAP9-001 processed_pseudogene Homo_sapiens 0 531
ENST00000405422 PPIAP31-001 processed_pseudogene Homo_sapiens 0 571
ENST00000411837 RP5-882O7.4-001 processed_pseudogene Homo_sapiens 0 496
ENST00000414143 PPIAP2-001 processed_pseudogene Homo_sapiens 0 496
ENST00000414193 RP1-164F3.8-001 processed_pseudogene Homo_sapiens 0 374
ENST00000414949 PPIAP29-001 processed_pseudogene Homo_sapiens 0 549
ENST00000415473 PPIAP30-001 processed_pseudogene Homo_sapiens 0 268
ENST00000415933 PPIA-007 nonsense_mediated_decay Homo_sapiens 0 429
ENST00000418291 PPIAP9-001 processed_pseudogene Homo_sapiens 0 531
ENST00000418508 AC019050.1-001 processed_pseudogene Homo_sapiens 0 494
ENST00000419275 PPIAL4G-001 protein_coding Homo_sapiens 0 477
ENST00000420099 PPIAP23-001 processed_pseudogene Homo_sapiens 0 514
ENST00000420177 PPIAP25-001 processed_pseudogene Homo_sapiens 0 440
ENST00000420447 PPIAP9-001 processed_pseudogene Homo_sapiens 0 525
ENST00000425840 RP11-509M23.1-001 processed_pseudogene Homo_sapiens 0 331
ENST00000428093 AC017083.2-001 processed_pseudogene Homo_sapiens 0 464
ENST00000430315 RP11-305L7.5-001 processed_pseudogene Homo_sapiens 0 388
ENST00000430461 ARMCX4-007 processed_transcript Homo_sapiens 0.0000000009 68
ENST00000430535 RP11-316K19.3-001 processed_pseudogene Homo_sapiens 0 381
ENST00000431677 ARMCX4-008 processed_transcript Homo_sapiens 0.000000002 68
ENST00000433011 ARMCX4-006 nonsense_mediated_decay Homo_sapiens 0.00000001 68
ENST00000433548 AC018463.5-001 processed_pseudogene Homo_sapiens 0 499
ENST00000434706 PPIAP13-001 processed_pseudogene Homo_sapiens 0 508
ENST00000438675 PPIAP10-001 processed_pseudogene Homo_sapiens 0 230
ENST00000440658 PPIAP9-001 processed_pseudogene Homo_sapiens 0 531
ENST00000440938 AC073465.3-001 processed_pseudogene Homo_sapiens 0 516
ENST00000441480 RP11-214N16.2-001 processed_pseudogene Homo_sapiens 0 499
ENST00000442288 PPIAP9-001 processed_pseudogene Homo_sapiens 0 531
ENST00000443177 RP11-420H19.2-001 processed_pseudogene Homo_sapiens 0 289
ENST00000443254 PPIAP9-001 processed_pseudogene Homo_sapiens 0 531
ENST00000443635 PPIAP9-001 processed_pseudogene Homo_sapiens 0 520
ENST00000446082 RP3-347M6.1-001 processed_pseudogene Homo_sapiens 0 449
ENST00000447284 RP11-312J18.3-001 processed_pseudogene Homo_sapiens 0 409
ENST00000447554 PPIAP9-001 processed_pseudogene Homo_sapiens 0 531
ENST00000448832 PPIAP1-001 processed_pseudogene Homo_sapiens 0 455
ENST00000448870 AC090804.1-001 processed_pseudogene Homo_sapiens 0 566
ENST00000450588 PPIAP3-001 processed_pseudogene Homo_sapiens 0 521
ENST00000451562 PPIA-006 protein_coding Homo_sapiens 0 424
ENST00000452091 AC005517.3-001 processed_pseudogene Homo_sapiens 0 438
ENST00000452411 AC091654.7-001 processed_pseudogene Homo_sapiens 0 531
ENST00000454070 PPIAP7-001 processed_pseudogene Homo_sapiens 0 457
ENST00000455837 RP11-269M20.1-001 processed_pseudogene Homo_sapiens 0 394
ENST00000462517 PPIAP16-001 processed_pseudogene Homo_sapiens 0 431
ENST00000462678 RP4-545C24.5-001 processed_pseudogene Homo_sapiens 0 366
ENST00000464473 PPIAP21-001 processed_pseudogene Homo_sapiens 0 492
ENST00000468812 PPIA-001 protein_coding Homo_sapiens 0 588
ENST00000469748 RP11-440K22.1-001 processed_pseudogene Homo_sapiens 0 468
ENST00000480603 PPIA-008 processed_transcript Homo_sapiens 0 363
ENST00000482002 AC005017.2-001 processed_pseudogene Homo_sapiens 0 468
ENST00000486414 PPIAP19-001 processed_pseudogene Homo_sapiens 0 486
ENST00000487348 RP11-415K20.1-001 processed_pseudogene Homo_sapiens 0 422
ENST00000487390 RP11-651P23.2-001 processed_pseudogene Homo_sapiens 0 407
ENST00000489459 PPIA-003 protein_coding Homo_sapiens 0 521
ENST00000491837 RP11-79L9.2-001 processed_pseudogene Homo_sapiens 0 473
ENST00000494484 PPIA-004 retained_intron Homo_sapiens 0 392
ENST00000496953 RP11-641C17.2-001 processed_pseudogene Homo_sapiens 0 499
ENST00000505144 CTD-2325A15.3-001 processed_pseudogene Homo_sapiens 0 466
ENST00000510729 PPIAP11-001 processed_pseudogene Homo_sapiens 0 555
ENST00000518241 RP11-678D18.1-001 processed_pseudogene Homo_sapiens 0 479
ENST00000519658 CTD-3107M8.2-001 processed_pseudogene Homo_sapiens 0 431
ENST00000527147 AP000620.1-001 processed_pseudogene Homo_sapiens 0 518
ENST00000530952 AP000662.9-001 processed_pseudogene Homo_sapiens 0 501
ENST00000544708 PPIAL4D-001 protein_coding Homo_sapiens 0 477
ENST00000550612 RP11-77I22.4-001 processed_pseudogene Homo_sapiens 0 302
ENST00000555184 CTD-2315A10.1-001 processed_pseudogene Homo_sapiens 0 285
ENST00000556877 RP11-545M17.3-001 processed_pseudogene Homo_sapiens 0 375
ENST00000557078 PPIAP6-001 processed_pseudogene Homo_sapiens 0 516
ENST00000557282 RP11-481K9.4-001 processed_pseudogene Homo_sapiens 0 488
ENST00000562009 CTD-2311M21.2-002 processed_transcript Homo_sapiens 0 542
ENST00000563335 AC009120.8-001 processed_pseudogene Homo_sapiens 0 481
ENST00000564109 CTD-2311M21.2-003 processed_transcript Homo_sapiens 0 359
ENST00000567149 RP11-391L3.5-001 processed_pseudogene Homo_sapiens 0 490
ENST00000567559 RP11-281J9.1-001 processed_pseudogene Homo_sapiens 0 453
ENST00000567565 RP11-24M17.3-001 processed_pseudogene Homo_sapiens 0 529
ENST00000569235 CTD-2311M21.2-001 transcribed_processed_pseudogene Homo_sapiens 0 536
ENST00000577856 PPIAL4B-002 protein_coding Homo_sapiens 0 483
ENST00000581138 PPIAL4F-001 protein_coding Homo_sapiens 0 483
ENST00000581164 PPIAL4F-001 protein_coding Homo_sapiens 0 483
ENST00000583752 CTD-2267D19.4-001 processed_pseudogene Homo_sapiens 0 483
ENST00000585245 PPIAL4C-001 protein_coding Homo_sapiens 0 494
ENST00000585753 CTC-448F2.3-001 processed_pseudogene Homo_sapiens 0 473
ENST00000596021 CTB-147C22.3-001 processed_pseudogene Homo_sapiens 0 494
ENST00000603675 RP11-33A14.3-001 processed_pseudogene Homo_sapiens 0 455
ENST00000605229 RP11-713H12.2-001 processed_pseudogene Homo_sapiens 0 322
ENST00000606284 CTD-2501B8.5-001 processed_pseudogene Homo_sapiens 0 497
ENST00000620047 PPIA-201 protein_coding Homo_sapiens 0 510

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