C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phospholipase D1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120834 Pld1-001 ENSMUSG00000027695 10090 + 3:27938695-28133239 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000120834
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000120834 2.443±1.07 0.170±0.14 1.530±0.55 0.276±0.03 0.821±0.29 3.498±1.85 0.866±0.18 1.109±0.46 1.180±0.47 2.545±1.17 0.230±0.04 1.192±0.47 1.761±0.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070U CIL_00070U_0002 CGP 3:27938695-28675858

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005515 IEA protein binding
GO:0005765 IEA lysosomal membrane
GO:0005768 ISO endosome
GO:0005794 ISO Golgi apparatus
GO:0006654 ISO phosphatidic acid biosynthetic process
GO:0008654 ISO phospholipid biosynthetic process
GO:0016020 IEA membrane
GO:0035091 IEA phosphatidylinositol binding
GO:0050830 IMP defense response to Gram-positive bacterium

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000351298 PLD1-001 protein_coding Homo_sapiens 0 1685
ENST00000356327 PLD1-002 protein_coding Homo_sapiens 0 3171
ENST00000418087 PLD1-010 protein_coding Homo_sapiens 0 418
ENST00000440204 PLD1-011 nonsense_mediated_decay Homo_sapiens 0 425
ENST00000446289 PLD1-003 protein_coding Homo_sapiens 0 741
ENST00000465816 PLD1-014 processed_transcript Homo_sapiens 0 736
ENST00000471075 PLD1-004 retained_intron Homo_sapiens 0 608
ENST00000475273 PLD1-016 processed_transcript Homo_sapiens 0 660
ENST00000481505 PLD1-013 retained_intron Homo_sapiens 0 521
ENST00000498278 PLD1-012 retained_intron Homo_sapiens 0 907

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