C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 15801
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120920 Gm15801-001 ENSMUSG00000096592 10090 - 19:40560537-40561058 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverENSMUST00000120920
Transcript ID Brain Liver
ENSMUST00000120920 1.127±0.00 0.758±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095J CIL_00095J_0002 VISTA 19:40075645-40678667
CIL_0007T2 CIL_0007T2_0002 VISTA 19:40167411-40768695
CIL_00067I CIL_00067I_0002 CGP 19:40295049-40588463
CIL_00067D CIL_00067D_0002 CGP 19:40550257-40612233

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370651 PTP4A1-004 protein_coding Homo_sapiens 0 821
ENST00000420539 PTP4A1P1-001 processed_pseudogene Homo_sapiens 0 577
ENST00000423476 PTP4A1P7-001 processed_pseudogene Homo_sapiens 0 654
ENST00000512479 PTP4A1P4-001 processed_pseudogene Homo_sapiens 0 396
ENST00000531034 PTP4A1P6-001 transcribed_processed_pseudogene Homo_sapiens 0 486
ENST00000554127 RP11-395B20.2-001 processed_pseudogene Homo_sapiens 5.60519e-45 183

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