C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, non-receptor type 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120934 Ptpn2-003 ENSMUSG00000024539 10090 - 18:67665511-67724573 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryTestisENSMUST00000120934
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000120934 0.668±0.09 1.214±0.00 1.147±0.00 1.517±0.41 2.412±0.00 0.982±0.49 1.201±0.31 2.111±0.51 0.497±0.00 2.836±2.62 1.840±1.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZP CIL_0007ZP_0002 VISTA 18:67068230-67671525
CIL_0001BA CIL_0001BA_0002 CGP 18:67641599-67724595
CIL_00068W CIL_00068W_0002 CGP 18:67665511-67795461

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0006470 IMP protein dephosphorylation
GO:0008286 IMP insulin receptor signaling pathway
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309660 PTPN2-002 protein_coding Homo_sapiens 0 1112
ENST00000327283 PTPN2-003 protein_coding Homo_sapiens 0 1112
ENST00000353319 PTPN2-001 protein_coding Homo_sapiens 0 1112
ENST00000423212 PTPN2P1-001 processed_pseudogene Homo_sapiens 0 773
ENST00000433704 PTPN2P2-001 processed_pseudogene Homo_sapiens 0 952
ENST00000585666 PTPN2-014 protein_coding Homo_sapiens 0 455
ENST00000587703 PTPN2-012 protein_coding Homo_sapiens 0 429
ENST00000589086 PTPN2-009 processed_transcript Homo_sapiens 0 261
ENST00000589216 PTPN2-008 nonsense_mediated_decay Homo_sapiens 0 689
ENST00000589444 PTPN2-006 retained_intron Homo_sapiens 0 497
ENST00000591115 PTPN2-004 protein_coding Homo_sapiens 0 710
ENST00000591497 PTPN2-005 protein_coding Homo_sapiens 0 867
ENST00000591901 PTPN2-015 protein_coding Homo_sapiens 0 496
ENST00000592059 PTPN2-011 protein_coding Homo_sapiens 0 621
ENST00000592776 PTPN2-010 nonsense_mediated_decay Homo_sapiens 0 710

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