C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12021
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121061 Gm12021-001 ENSMUSG00000082852 10090 - 11:18508037-18509940 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderColonHeartKidneyLiverLungOvaryTestisENSMUST00000121061
Transcript ID Adipose Adrenal Bladder Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000121061 0.014±0.00 0.033±0.00 0.034±0.01 0.030±0.00 0.012±0.00 0.014±0.00 0.005±0.00 0.029±0.01 0.182±0.13 0.002±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JR CIL_0007JR_0004 UCNEbase 11:17198316-19679637
CIL_000805 CIL_000805_0002 VISTA 11:18056946-18658282
CIL_0007XO CIL_0007XO_0002 VISTA 11:18304266-18905268
CIL_00094L CIL_00094L_0002 VISTA 11:18449398-19050623

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377500 STAM-003 protein_coding Homo_sapiens 0 233
ENST00000377524 STAM-001 protein_coding Homo_sapiens 0 761
ENST00000445846 STAM-002 nonsense_mediated_decay Homo_sapiens 0 246
ENST00000486183 STAM-004 retained_intron Homo_sapiens 4.00001e-41 171
ENST00000494250 STAM-005 retained_intron Homo_sapiens 0 239

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